diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-22 09:53:58 +0100 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-22 09:53:58 +0100 |
commit | 6c0c0986d7c33ebcc290cad12b02eaacafa796ad (patch) | |
tree | 32271aff5a17e7a0823f8773be48d08fb34abfa5 /docs/articles | |
parent | 39d5dc6988389f026d5165cac208ec63d0645a77 (diff) |
Static documentation rebuilt by pkgdown
Diffstat (limited to 'docs/articles')
-rw-r--r-- | docs/articles/FOCUS_D.html | 8 | ||||
-rw-r--r-- | docs/articles/FOCUS_L.html | 42 | ||||
-rw-r--r-- | docs/articles/mkin.html | 2 | ||||
-rw-r--r-- | docs/articles/twa.html | 2 | ||||
-rw-r--r-- | docs/articles/web_only/FOCUS_Z.html | 2 | ||||
-rw-r--r-- | docs/articles/web_only/compiled_models.html | 12 |
6 files changed, 34 insertions, 34 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index 33424756..38e59d9d 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -85,7 +85,7 @@ <h1>Example evaluation of FOCUS Example Dataset D</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>FOCUS_D.Rmd</code></div> @@ -163,8 +163,8 @@ <div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:41 2019 -## Date of summary: Thu Feb 21 16:13:41 2019 +## Date of fit: Fri Feb 22 09:51:20 2019 +## Date of summary: Fri Feb 22 09:51:21 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -172,7 +172,7 @@ ## ## Model predictions using solution type deSolve ## -## Fitted with method Port using 153 model solutions performed in 0.697 s +## Fitted with method Port using 153 model solutions performed in 0.693 s ## ## Weighting: none ## diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index b422b315..13131315 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -85,7 +85,7 @@ <h1>Example evaluation of FOCUS Laboratory Data L1 to L3</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>FOCUS_L.Rmd</code></div> @@ -111,8 +111,8 @@ <a class="sourceLine" id="cb2-2" data-line-number="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:43 2019 -## Date of summary: Thu Feb 21 16:13:43 2019 +## Date of fit: Fri Feb 22 09:51:22 2019 +## Date of summary: Fri Feb 22 09:51:22 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent @@ -202,15 +202,15 @@ <div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:45 2019 -## Date of summary: Thu Feb 21 16:13:45 2019 +## Date of fit: Fri Feb 22 09:51:24 2019 +## Date of summary: Fri Feb 22 09:51:24 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 611 model solutions performed in 1.509 s +## Fitted with method Port using 611 model solutions performed in 1.515 s ## ## Weighting: none ## @@ -297,15 +297,15 @@ <div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:45 2019 -## Date of summary: Thu Feb 21 16:13:45 2019 +## Date of fit: Fri Feb 22 09:51:25 2019 +## Date of summary: Fri Feb 22 09:51:25 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 81 model solutions performed in 0.197 s +## Fitted with method Port using 81 model solutions performed in 0.198 s ## ## Weighting: none ## @@ -368,8 +368,8 @@ <div class="sourceCode" id="cb15"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb15-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:46 2019 -## Date of summary: Thu Feb 21 16:13:46 2019 +## Date of fit: Fri Feb 22 09:51:26 2019 +## Date of summary: Fri Feb 22 09:51:26 2019 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -378,7 +378,7 @@ ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 336 model solutions performed in 0.842 s +## Fitted with method Port using 336 model solutions performed in 0.847 s ## ## Weighting: none ## @@ -460,8 +460,8 @@ <div class="sourceCode" id="cb21"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb21-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:47 2019 -## Date of summary: Thu Feb 21 16:13:48 2019 +## Date of fit: Fri Feb 22 09:51:27 2019 +## Date of summary: Fri Feb 22 09:51:27 2019 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -470,7 +470,7 @@ ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 137 model solutions performed in 0.345 s +## Fitted with method Port using 137 model solutions performed in 0.347 s ## ## Weighting: none ## @@ -561,15 +561,15 @@ <div class="sourceCode" id="cb26"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb26-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:48 2019 -## Date of summary: Thu Feb 21 16:13:48 2019 +## Date of fit: Fri Feb 22 09:51:27 2019 +## Date of summary: Fri Feb 22 09:51:28 2019 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 46 model solutions performed in 0.11 s +## Fitted with method Port using 46 model solutions performed in 0.112 s ## ## Weighting: none ## @@ -621,15 +621,15 @@ <div class="sourceCode" id="cb28"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb28-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.48.1 ## R version used for fitting: 3.5.2 -## Date of fit: Thu Feb 21 16:13:48 2019 -## Date of summary: Thu Feb 21 16:13:48 2019 +## Date of fit: Fri Feb 22 09:51:28 2019 +## Date of summary: Fri Feb 22 09:51:28 2019 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 66 model solutions performed in 0.163 s +## Fitted with method Port using 66 model solutions performed in 0.165 s ## ## Weighting: none ## diff --git a/docs/articles/mkin.html b/docs/articles/mkin.html index 8f770680..9baa44e4 100644 --- a/docs/articles/mkin.html +++ b/docs/articles/mkin.html @@ -85,7 +85,7 @@ <h1>Introduction to mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>mkin.Rmd</code></div> diff --git a/docs/articles/twa.html b/docs/articles/twa.html index 2dbe2a32..8c340557 100644 --- a/docs/articles/twa.html +++ b/docs/articles/twa.html @@ -85,7 +85,7 @@ <h1>Calculation of time weighted average concentrations with mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>twa.Rmd</code></div> diff --git a/docs/articles/web_only/FOCUS_Z.html b/docs/articles/web_only/FOCUS_Z.html index b4fa25ac..b1e2811c 100644 --- a/docs/articles/web_only/FOCUS_Z.html +++ b/docs/articles/web_only/FOCUS_Z.html @@ -85,7 +85,7 @@ <h1>Example evaluation of FOCUS dataset Z</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>FOCUS_Z.Rmd</code></div> diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html index 8f13b969..e9f8fa99 100644 --- a/docs/articles/web_only/compiled_models.html +++ b/docs/articles/web_only/compiled_models.html @@ -85,7 +85,7 @@ <h1>Performance benefit by using compiled model definitions in mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2019-02-21</h4> + <h4 class="date">2019-02-22</h4> <div class="hidden name"><code>compiled_models.Rmd</code></div> @@ -126,9 +126,9 @@ <a class="sourceLine" id="cb5-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Lade nötiges Paket: rbenchmark</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 3 deSolve, compiled 3 2.347 1.000 2.346 0 -## 1 deSolve, not compiled 3 17.693 7.539 17.684 0 -## 2 Eigenvalue based 3 2.907 1.239 2.905 0 +## 3 deSolve, compiled 3 2.336 1.000 2.335 0 +## 1 deSolve, not compiled 3 17.610 7.539 17.602 0 +## 2 Eigenvalue based 3 2.899 1.241 2.897 0 ## user.child sys.child ## 3 0 0 ## 1 0 0 @@ -157,8 +157,8 @@ <a class="sourceLine" id="cb8-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 2 deSolve, compiled 3 4.278 1.000 4.276 0 -## 1 deSolve, not compiled 3 37.855 8.849 37.833 0 +## 2 deSolve, compiled 3 4.122 1.000 4.119 0 +## 1 deSolve, not compiled 3 37.359 9.063 37.343 0 ## user.child sys.child ## 2 0 0 ## 1 0 0</code></pre> |