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authorJohannes Ranke <jranke@uni-bremen.de>2019-03-04 14:09:45 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2019-03-04 14:09:45 +0100
commit9d6a975a0e3850a36889a18b5d9929d27b901ab3 (patch)
tree2130084703b45ba08a7f94e0d446a081a4ba2894 /docs/articles
parentd0b124992232dde30fbff83dd4eeae8fc977d3ba (diff)
Make some example output more reproducible
In order to avoid some unnecessary documentation rebuilds
Diffstat (limited to 'docs/articles')
-rw-r--r--docs/articles/FOCUS_D.html6
-rw-r--r--docs/articles/FOCUS_L.html36
-rw-r--r--docs/articles/web_only/NAFTA_examples.html14
-rw-r--r--docs/articles/web_only/compiled_models.html10
4 files changed, 33 insertions, 33 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html
index fabb567a..376acee2 100644
--- a/docs/articles/FOCUS_D.html
+++ b/docs/articles/FOCUS_D.html
@@ -166,8 +166,8 @@
<div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:33 2019
-## Date of summary: Mon Mar 4 10:09:33 2019
+## Date of fit: Mon Mar 4 14:06:39 2019
+## Date of summary: Mon Mar 4 14:06:39 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -175,7 +175,7 @@
##
## Model predictions using solution type deSolve
##
-## Fitted with method Port using 153 model solutions performed in 0.687 s
+## Fitted with method Port using 153 model solutions performed in 0.693 s
##
## Weighting: none
##
diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html
index 7157f973..5dac9999 100644
--- a/docs/articles/FOCUS_L.html
+++ b/docs/articles/FOCUS_L.html
@@ -114,15 +114,15 @@
<a class="sourceLine" id="cb2-2" title="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:35 2019
-## Date of summary: Mon Mar 4 10:09:35 2019
+## Date of fit: Mon Mar 4 14:06:41 2019
+## Date of summary: Mon Mar 4 14:06:41 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 37 model solutions performed in 0.102 s
+## Fitted with method Port using 37 model solutions performed in 0.095 s
##
## Weighting: none
##
@@ -205,15 +205,15 @@
<div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:36 2019
-## Date of summary: Mon Mar 4 10:09:36 2019
+## Date of fit: Mon Mar 4 14:06:43 2019
+## Date of summary: Mon Mar 4 14:06:43 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 611 model solutions performed in 1.508 s
+## Fitted with method Port using 611 model solutions performed in 1.502 s
##
## Weighting: none
##
@@ -300,8 +300,8 @@
<div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:37 2019
-## Date of summary: Mon Mar 4 10:09:37 2019
+## Date of fit: Mon Mar 4 14:06:43 2019
+## Date of summary: Mon Mar 4 14:06:43 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
@@ -373,8 +373,8 @@
## covariance matrix; singular system.</code></pre>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:38 2019
-## Date of summary: Mon Mar 4 10:09:38 2019
+## Date of fit: Mon Mar 4 14:06:44 2019
+## Date of summary: Mon Mar 4 14:06:44 2019
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -383,7 +383,7 @@
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 336 model solutions performed in 0.841 s
+## Fitted with method Port using 336 model solutions performed in 0.84 s
##
## Weighting: none
##
@@ -463,8 +463,8 @@
<div class="sourceCode" id="cb20"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb20-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:39 2019
-## Date of summary: Mon Mar 4 10:09:39 2019
+## Date of fit: Mon Mar 4 14:06:45 2019
+## Date of summary: Mon Mar 4 14:06:46 2019
##
## Equations:
## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) *
@@ -564,8 +564,8 @@
<div class="sourceCode" id="cb25"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb25-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:40 2019
-## Date of summary: Mon Mar 4 10:09:40 2019
+## Date of fit: Mon Mar 4 14:06:46 2019
+## Date of summary: Mon Mar 4 14:06:46 2019
##
## Equations:
## d_parent/dt = - k_parent_sink * parent
@@ -624,15 +624,15 @@
<div class="sourceCode" id="cb27"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb27-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>
<pre><code>## mkin version used for fitting: 0.9.48.1
## R version used for fitting: 3.5.2
-## Date of fit: Mon Mar 4 10:09:40 2019
-## Date of summary: Mon Mar 4 10:09:40 2019
+## Date of fit: Mon Mar 4 14:06:46 2019
+## Date of summary: Mon Mar 4 14:06:46 2019
##
## Equations:
## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
##
## Model predictions using solution type analytical
##
-## Fitted with method Port using 66 model solutions performed in 0.162 s
+## Fitted with method Port using 66 model solutions performed in 0.173 s
##
## Weighting: none
##
diff --git a/docs/articles/web_only/NAFTA_examples.html b/docs/articles/web_only/NAFTA_examples.html
index db1fc478..12e5d522 100644
--- a/docs/articles/web_only/NAFTA_examples.html
+++ b/docs/articles/web_only/NAFTA_examples.html
@@ -347,7 +347,7 @@
## DT50 DT90 DT50_rep
## SFO 86.3 287 86.3
## IORE 53.4 668 201.0
-## DFOP 55.6 517 253.5
+## DFOP 55.6 517 253.0
##
## Representative half-life:
## [1] 201.0316</code></pre>
@@ -492,9 +492,9 @@
##
## DTx values:
## DT50 DT90 DT50_rep
-## SFO 14.0 46.5 13.99
+## SFO 14.0 46.5 14.00
## IORE 16.4 29.4 8.86
-## DFOP 14.0 46.5 13.99
+## DFOP 14.0 46.5 14.00
##
## Representative half-life:
## [1] 8.862193</code></pre>
@@ -644,9 +644,9 @@
##
## DTx values:
## DT50 DT90 DT50_rep
-## SFO 11.8 39.1 11.76
+## SFO 11.8 39.1 11.80
## IORE 12.9 31.4 9.46
-## DFOP 11.8 39.1 11.76
+## DFOP 11.8 39.1 11.80
##
## Representative half-life:
## [1] 9.461912</code></pre>
@@ -830,9 +830,9 @@
##
## DTx values:
## DT50 DT90 DT50_rep
-## SFO 143 474 142.7
+## SFO 143 474 143.0
## IORE 131 236 71.2
-## DFOP 143 474 142.7
+## DFOP 143 474 143.0
##
## Representative half-life:
## [1] 71.18014</code></pre>
diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html
index 1d96ea76..269b1098 100644
--- a/docs/articles/web_only/compiled_models.html
+++ b/docs/articles/web_only/compiled_models.html
@@ -129,9 +129,9 @@
<a class="sourceLine" id="cb5-16" title="16">}</a></code></pre></div>
<pre><code>## Lade nötiges Paket: rbenchmark</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 3 deSolve, compiled 3 2.313 1.000 2.312 0
-## 1 deSolve, not compiled 3 17.602 7.610 17.595 0
-## 2 Eigenvalue based 3 2.853 1.233 2.851 0
+## 3 deSolve, compiled 3 2.310 1.000 2.308 0
+## 1 deSolve, not compiled 3 17.509 7.580 17.500 0
+## 2 Eigenvalue based 3 2.859 1.238 2.858 0
## user.child sys.child
## 3 0 0
## 1 0 0
@@ -160,8 +160,8 @@
<a class="sourceLine" id="cb8-16" title="16">}</a></code></pre></div>
<pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre>
<pre><code>## test replications elapsed relative user.self sys.self
-## 2 deSolve, compiled 3 4.049 1.000 4.047 0
-## 1 deSolve, not compiled 3 37.135 9.171 37.119 0
+## 2 deSolve, compiled 3 4.074 1.000 4.072 0
+## 1 deSolve, not compiled 3 37.219 9.136 37.203 0
## user.child sys.child
## 2 0 0
## 1 0 0</code></pre>

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