diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-21 16:16:21 +0100 | 
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-02-21 16:16:21 +0100 | 
| commit | 5181a55b1619c153b690db97ee82698bf76525ff (patch) | |
| tree | 205137000fd034ced0d55de2830e6fb5a45c4535 /docs/articles | |
| parent | 6695a307c4be2b8eee1bacd75b25fc10c3dd02b1 (diff) | |
Static documentation rebuilt by pkgdown
to get the codecov badge into the docs
Diffstat (limited to 'docs/articles')
| -rw-r--r-- | docs/articles/FOCUS_D.html | 6 | ||||
| -rw-r--r-- | docs/articles/FOCUS_L.html | 38 | ||||
| -rw-r--r-- | docs/articles/web_only/compiled_models.html | 10 | 
3 files changed, 27 insertions, 27 deletions
| diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index 4dd23fd2..33424756 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -163,8 +163,8 @@  <div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:35 2019  -## Date of summary: Thu Feb 21 15:13:35 2019  +## Date of fit:     Thu Feb 21 16:13:41 2019  +## Date of summary: Thu Feb 21 16:13:41 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -172,7 +172,7 @@  ##   ## Model predictions using solution type deSolve   ##  -## Fitted with method Port using 153 model solutions performed in 0.683 s +## Fitted with method Port using 153 model solutions performed in 0.697 s  ##   ## Weighting: none  ##  diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index 0820b21a..b422b315 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -111,15 +111,15 @@  <a class="sourceLine" id="cb2-2" data-line-number="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:37 2019  -## Date of summary: Thu Feb 21 15:13:37 2019  +## Date of fit:     Thu Feb 21 16:13:43 2019  +## Date of summary: Thu Feb 21 16:13:43 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 37 model solutions performed in 0.101 s +## Fitted with method Port using 37 model solutions performed in 0.095 s  ##   ## Weighting: none  ##  @@ -202,15 +202,15 @@  <div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:39 2019  -## Date of summary: Thu Feb 21 15:13:39 2019  +## Date of fit:     Thu Feb 21 16:13:45 2019  +## Date of summary: Thu Feb 21 16:13:45 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 611 model solutions performed in 1.545 s +## Fitted with method Port using 611 model solutions performed in 1.509 s  ##   ## Weighting: none  ##  @@ -297,8 +297,8 @@  <div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:39 2019  -## Date of summary: Thu Feb 21 15:13:39 2019  +## Date of fit:     Thu Feb 21 16:13:45 2019  +## Date of summary: Thu Feb 21 16:13:45 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent @@ -368,8 +368,8 @@  <div class="sourceCode" id="cb15"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb15-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:40 2019  -## Date of summary: Thu Feb 21 15:13:40 2019  +## Date of fit:     Thu Feb 21 16:13:46 2019  +## Date of summary: Thu Feb 21 16:13:46 2019   ##   ## Equations:  ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -378,7 +378,7 @@  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 336 model solutions performed in 0.852 s +## Fitted with method Port using 336 model solutions performed in 0.842 s  ##   ## Weighting: none  ##  @@ -460,8 +460,8 @@  <div class="sourceCode" id="cb21"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb21-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:41 2019  -## Date of summary: Thu Feb 21 15:13:41 2019  +## Date of fit:     Thu Feb 21 16:13:47 2019  +## Date of summary: Thu Feb 21 16:13:48 2019   ##   ## Equations:  ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -561,15 +561,15 @@  <div class="sourceCode" id="cb26"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb26-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:42 2019  -## Date of summary: Thu Feb 21 15:13:42 2019  +## Date of fit:     Thu Feb 21 16:13:48 2019  +## Date of summary: Thu Feb 21 16:13:48 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 46 model solutions performed in 0.112 s +## Fitted with method Port using 46 model solutions performed in 0.11 s  ##   ## Weighting: none  ##  @@ -621,15 +621,15 @@  <div class="sourceCode" id="cb28"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb28-1" data-line-number="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Thu Feb 21 15:13:42 2019  -## Date of summary: Thu Feb 21 15:13:42 2019  +## Date of fit:     Thu Feb 21 16:13:48 2019  +## Date of summary: Thu Feb 21 16:13:48 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 66 model solutions performed in 0.169 s +## Fitted with method Port using 66 model solutions performed in 0.163 s  ##   ## Weighting: none  ##  diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html index b00fda46..8f13b969 100644 --- a/docs/articles/web_only/compiled_models.html +++ b/docs/articles/web_only/compiled_models.html @@ -126,9 +126,9 @@  <a class="sourceLine" id="cb5-16" data-line-number="16">}</a></code></pre></div>  <pre><code>## Lade nötiges Paket: rbenchmark</code></pre>  <pre><code>##                    test replications elapsed relative user.self sys.self -## 3     deSolve, compiled            3   2.340    1.000     2.338        0 -## 1 deSolve, not compiled            3  17.729    7.576    17.720        0 -## 2      Eigenvalue based            3   2.889    1.235     2.888        0 +## 3     deSolve, compiled            3   2.347    1.000     2.346        0 +## 1 deSolve, not compiled            3  17.693    7.539    17.684        0 +## 2      Eigenvalue based            3   2.907    1.239     2.905        0  ##   user.child sys.child  ## 3          0         0  ## 1          0         0 @@ -157,8 +157,8 @@  <a class="sourceLine" id="cb8-16" data-line-number="16">}</a></code></pre></div>  <pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre>  <pre><code>##                    test replications elapsed relative user.self sys.self -## 2     deSolve, compiled            3   4.122     1.00     4.120        0 -## 1 deSolve, not compiled            3  37.471     9.09    37.452        0 +## 2     deSolve, compiled            3   4.278    1.000     4.276        0 +## 1 deSolve, not compiled            3  37.855    8.849    37.833        0  ##   user.child sys.child  ## 2          0         0  ## 1          0         0</code></pre> | 
