diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-03-04 14:09:45 +0100 | 
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-03-04 14:09:45 +0100 | 
| commit | 9d6a975a0e3850a36889a18b5d9929d27b901ab3 (patch) | |
| tree | 2130084703b45ba08a7f94e0d446a081a4ba2894 /docs/articles | |
| parent | d0b124992232dde30fbff83dd4eeae8fc977d3ba (diff) | |
Make some example output more reproducible
In order to avoid some unnecessary documentation rebuilds
Diffstat (limited to 'docs/articles')
| -rw-r--r-- | docs/articles/FOCUS_D.html | 6 | ||||
| -rw-r--r-- | docs/articles/FOCUS_L.html | 36 | ||||
| -rw-r--r-- | docs/articles/web_only/NAFTA_examples.html | 14 | ||||
| -rw-r--r-- | docs/articles/web_only/compiled_models.html | 10 | 
4 files changed, 33 insertions, 33 deletions
| diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index fabb567a..376acee2 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -166,8 +166,8 @@  <div class="sourceCode" id="cb10"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb10-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(fit)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:33 2019  -## Date of summary: Mon Mar  4 10:09:33 2019  +## Date of fit:     Mon Mar  4 14:06:39 2019  +## Date of summary: Mon Mar  4 14:06:39 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent @@ -175,7 +175,7 @@  ##   ## Model predictions using solution type deSolve   ##  -## Fitted with method Port using 153 model solutions performed in 0.687 s +## Fitted with method Port using 153 model solutions performed in 0.693 s  ##   ## Weighting: none  ##  diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index 7157f973..5dac9999 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -114,15 +114,15 @@  <a class="sourceLine" id="cb2-2" title="2"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.SFO)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:35 2019  -## Date of summary: Mon Mar  4 10:09:35 2019  +## Date of fit:     Mon Mar  4 14:06:41 2019  +## Date of summary: Mon Mar  4 14:06:41 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 37 model solutions performed in 0.102 s +## Fitted with method Port using 37 model solutions performed in 0.095 s  ##   ## Weighting: none  ##  @@ -205,15 +205,15 @@  <div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:36 2019  -## Date of summary: Mon Mar  4 10:09:36 2019  +## Date of fit:     Mon Mar  4 14:06:43 2019  +## Date of summary: Mon Mar  4 14:06:43 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 611 model solutions performed in 1.508 s +## Fitted with method Port using 611 model solutions performed in 1.502 s  ##   ## Weighting: none  ##  @@ -300,8 +300,8 @@  <div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:37 2019  -## Date of summary: Mon Mar  4 10:09:37 2019  +## Date of fit:     Mon Mar  4 14:06:43 2019  +## Date of summary: Mon Mar  4 14:06:43 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent @@ -373,8 +373,8 @@  ## covariance matrix; singular system.</code></pre>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:38 2019  -## Date of summary: Mon Mar  4 10:09:38 2019  +## Date of fit:     Mon Mar  4 14:06:44 2019  +## Date of summary: Mon Mar  4 14:06:44 2019   ##   ## Equations:  ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -383,7 +383,7 @@  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 336 model solutions performed in 0.841 s +## Fitted with method Port using 336 model solutions performed in 0.84 s  ##   ## Weighting: none  ##  @@ -463,8 +463,8 @@  <div class="sourceCode" id="cb20"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb20-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:39 2019  -## Date of summary: Mon Mar  4 10:09:39 2019  +## Date of fit:     Mon Mar  4 14:06:45 2019  +## Date of summary: Mon Mar  4 14:06:46 2019   ##   ## Equations:  ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -564,8 +564,8 @@  <div class="sourceCode" id="cb25"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb25-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:40 2019  -## Date of summary: Mon Mar  4 10:09:40 2019  +## Date of fit:     Mon Mar  4 14:06:46 2019  +## Date of summary: Mon Mar  4 14:06:46 2019   ##   ## Equations:  ## d_parent/dt = - k_parent_sink * parent @@ -624,15 +624,15 @@  <div class="sourceCode" id="cb27"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb27-1" title="1"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/summary">summary</a></span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div>  <pre><code>## mkin version used for fitting:    0.9.48.1   ## R version used for fitting:       3.5.2  -## Date of fit:     Mon Mar  4 10:09:40 2019  -## Date of summary: Mon Mar  4 10:09:40 2019  +## Date of fit:     Mon Mar  4 14:06:46 2019  +## Date of summary: Mon Mar  4 14:06:46 2019   ##   ## Equations:  ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent  ##   ## Model predictions using solution type analytical   ##  -## Fitted with method Port using 66 model solutions performed in 0.162 s +## Fitted with method Port using 66 model solutions performed in 0.173 s  ##   ## Weighting: none  ##  diff --git a/docs/articles/web_only/NAFTA_examples.html b/docs/articles/web_only/NAFTA_examples.html index db1fc478..12e5d522 100644 --- a/docs/articles/web_only/NAFTA_examples.html +++ b/docs/articles/web_only/NAFTA_examples.html @@ -347,7 +347,7 @@  ##      DT50 DT90 DT50_rep  ## SFO  86.3  287     86.3  ## IORE 53.4  668    201.0 -## DFOP 55.6  517    253.5 +## DFOP 55.6  517    253.0  ##   ## Representative half-life:  ## [1] 201.0316</code></pre> @@ -492,9 +492,9 @@  ##   ## DTx values:  ##      DT50 DT90 DT50_rep -## SFO  14.0 46.5    13.99 +## SFO  14.0 46.5    14.00  ## IORE 16.4 29.4     8.86 -## DFOP 14.0 46.5    13.99 +## DFOP 14.0 46.5    14.00  ##   ## Representative half-life:  ## [1] 8.862193</code></pre> @@ -644,9 +644,9 @@  ##   ## DTx values:  ##      DT50 DT90 DT50_rep -## SFO  11.8 39.1    11.76 +## SFO  11.8 39.1    11.80  ## IORE 12.9 31.4     9.46 -## DFOP 11.8 39.1    11.76 +## DFOP 11.8 39.1    11.80  ##   ## Representative half-life:  ## [1] 9.461912</code></pre> @@ -830,9 +830,9 @@  ##   ## DTx values:  ##      DT50 DT90 DT50_rep -## SFO   143  474    142.7 +## SFO   143  474    143.0  ## IORE  131  236     71.2 -## DFOP  143  474    142.7 +## DFOP  143  474    143.0  ##   ## Representative half-life:  ## [1] 71.18014</code></pre> diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html index 1d96ea76..269b1098 100644 --- a/docs/articles/web_only/compiled_models.html +++ b/docs/articles/web_only/compiled_models.html @@ -129,9 +129,9 @@  <a class="sourceLine" id="cb5-16" title="16">}</a></code></pre></div>  <pre><code>## Lade nötiges Paket: rbenchmark</code></pre>  <pre><code>##                    test replications elapsed relative user.self sys.self -## 3     deSolve, compiled            3   2.313    1.000     2.312        0 -## 1 deSolve, not compiled            3  17.602    7.610    17.595        0 -## 2      Eigenvalue based            3   2.853    1.233     2.851        0 +## 3     deSolve, compiled            3   2.310    1.000     2.308        0 +## 1 deSolve, not compiled            3  17.509    7.580    17.500        0 +## 2      Eigenvalue based            3   2.859    1.238     2.858        0  ##   user.child sys.child  ## 3          0         0  ## 1          0         0 @@ -160,8 +160,8 @@  <a class="sourceLine" id="cb8-16" title="16">}</a></code></pre></div>  <pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre>  <pre><code>##                    test replications elapsed relative user.self sys.self -## 2     deSolve, compiled            3   4.049    1.000     4.047        0 -## 1 deSolve, not compiled            3  37.135    9.171    37.119        0 +## 2     deSolve, compiled            3   4.074    1.000     4.072        0 +## 1 deSolve, not compiled            3  37.219    9.136    37.203        0  ##   user.child sys.child  ## 2          0         0  ## 1          0         0</code></pre> | 
