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| author | Johannes Ranke <jranke@uni-bremen.de> | 2021-02-15 17:36:12 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2021-02-15 17:36:12 +0100 |
| commit | b9be19af5e3085216d0cd5af439332f631fa8b92 (patch) | |
| tree | e10511f60e7f1713b781d5ea2acf885f3d1e6767 /docs/dev/articles/FOCUS_D.html | |
| parent | 11c7f26dd6c532d977d9875f3c16952c7bba37ca (diff) | |
Fully rebuild docs, rerun tests and check
Diffstat (limited to 'docs/dev/articles/FOCUS_D.html')
| -rw-r--r-- | docs/dev/articles/FOCUS_D.html | 23 |
1 files changed, 11 insertions, 12 deletions
diff --git a/docs/dev/articles/FOCUS_D.html b/docs/dev/articles/FOCUS_D.html index dd86f677..a35a255a 100644 --- a/docs/dev/articles/FOCUS_D.html +++ b/docs/dev/articles/FOCUS_D.html @@ -32,7 +32,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">mkin</a> - <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">0.9.50.4</span> + <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.0.3.9000</span> </span> </div> @@ -81,7 +81,7 @@ <ul class="nav navbar-nav navbar-right"> <li> <a href="https://github.com/jranke/mkin/"> - <span class="fab fa fab fa-github fa-lg"></span> + <span class="fab fa-github fa-lg"></span> </a> </li> @@ -95,14 +95,13 @@ - </header><link href="FOCUS_D_files/anchor-sections-1.0/anchor-sections.css" rel="stylesheet"> -<script src="FOCUS_D_files/anchor-sections-1.0/anchor-sections.js"></script><div class="row"> + </header><script src="FOCUS_D_files/header-attrs-2.6/header-attrs.js"></script><script src="FOCUS_D_files/accessible-code-block-0.0.1/empty-anchor.js"></script><div class="row"> <div class="col-md-9 contents"> <div class="page-header toc-ignore"> <h1 data-toc-skip>Example evaluation of FOCUS Example Dataset D</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2020-11-30</h4> + <h4 class="date">Last change 31 January 2019 (rebuilt 2021-02-15)</h4> <small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/master/vignettes/FOCUS_D.rmd"><code>vignettes/FOCUS_D.rmd</code></a></small> <div class="hidden name"><code>FOCUS_D.rmd</code></div> @@ -187,10 +186,10 @@ <p>A comprehensive report of the results is obtained using the <code>summary</code> method for <code>mkinfit</code> objects.</p> <div class="sourceCode" id="cb11"><pre class="downlit sourceCode r"> <code class="sourceCode R"><span class="fu"><a href="https://rdrr.io/pkg/saemix/man/summary-methods.html">summary</a></span><span class="op">(</span><span class="va">fit</span><span class="op">)</span></code></pre></div> -<pre><code>## mkin version used for fitting: 0.9.50.4 +<pre><code>## mkin version used for fitting: 1.0.3.9000 ## R version used for fitting: 4.0.3 -## Date of fit: Mon Nov 30 16:01:50 2020 -## Date of summary: Mon Nov 30 16:01:50 2020 +## Date of fit: Mon Feb 15 17:13:36 2021 +## Date of summary: Mon Feb 15 17:13:37 2021 ## ## Equations: ## d_parent/dt = - k_parent * parent @@ -241,11 +240,11 @@ ## ## Parameter correlation: ## parent_0 log_k_parent log_k_m1 f_parent_qlogis sigma -## parent_0 1.000e+00 5.174e-01 -1.688e-01 -5.471e-01 -1.171e-06 -## log_k_parent 5.174e-01 1.000e+00 -3.263e-01 -5.426e-01 -8.481e-07 -## log_k_m1 -1.688e-01 -3.263e-01 1.000e+00 7.478e-01 8.209e-07 +## parent_0 1.000e+00 5.174e-01 -1.688e-01 -5.471e-01 -1.172e-06 +## log_k_parent 5.174e-01 1.000e+00 -3.263e-01 -5.426e-01 -8.483e-07 +## log_k_m1 -1.688e-01 -3.263e-01 1.000e+00 7.478e-01 8.205e-07 ## f_parent_qlogis -5.471e-01 -5.426e-01 7.478e-01 1.000e+00 1.305e-06 -## sigma -1.171e-06 -8.481e-07 8.209e-07 1.305e-06 1.000e+00 +## sigma -1.172e-06 -8.483e-07 8.205e-07 1.305e-06 1.000e+00 ## ## Backtransformed parameters: ## Confidence intervals for internally transformed parameters are asymmetric. |