diff options
author | Johannes Ranke <jranke@uni-bremen.de> | 2020-11-19 15:41:24 +0100 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-11-19 15:41:24 +0100 |
commit | db9ae6a0c9cecb92048fde6f06af1da183c09b5f (patch) | |
tree | f0ea97545549c71bd7aa3d13afed422fd402f0e6 /docs/dev/news | |
parent | 6441a9f35d66f2c4d38c0036f99cd8f509d76f3b (diff) |
Depend on parallel, doc improvements
By depending on parallel instead of importing it, functions to set up
and stop a cluster are always available when mkin is loaded.
The use of multicore processing in mmkin on Windows is now documented in
the help file, which brings mkin closer to a version 1.0 #9.
Diffstat (limited to 'docs/dev/news')
-rw-r--r-- | docs/dev/news/index.html | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/docs/dev/news/index.html b/docs/dev/news/index.html index 3a868426..b8577da0 100644 --- a/docs/dev/news/index.html +++ b/docs/dev/news/index.html @@ -146,6 +146,10 @@ <a href="#mkin-0-9-50-4-unreleased" class="anchor"></a>mkin 0.9.50.4 (unreleased)<small> Unreleased </small> </h1> <ul> +<li><p>‘f_norm_temp_focus’ generic function to normalise time intervals using the FOCUS method, with methods for numeric vectors and ‘mkindsg’ objects</p></li> +<li><p>‘mkindsg’ R6 class for groups of ‘mkinds’ datasets with metadata</p></li> +<li><p>‘D24_2014’ dataset</p></li> +<li><p>‘focus_soil_moisture’ FOCUS default soil moisture data</p></li> <li><p>‘plot.mixed.mmkin’ method used for ‘nlme.mmkin’ and ‘saem.mmkin’, both inheriting from ‘mixed.mmkin’ (currently virtual)</p></li> <li><p>‘saem’ generic function to fit saemix models, with a generator ‘saem.mmkin’, summary and plot methods</p></li> <li><p>‘transform_odeparms’, ‘backtransform_odeparms’: Use logit transformation for solitary fractions like the g parameter of the DFOP model, or formation fractions for a pathway to only one target variable</p></li> @@ -478,7 +482,7 @@ <ul> <li><p>Add plots to <code>compiled_models</code> vignette</p></li> <li><p>Give an explanatory error message when mkinmod fails due to a missing definition of a target variable</p></li> -<li><p><code><a href="../reference/print.mkinmod.html">print.mkinmod()</a></code>: Improve formatting when printing mkinmod model definitions</p></li> +<li><p><code><a href="../reference/mkinmod.html">print.mkinmod()</a></code>: Improve formatting when printing mkinmod model definitions</p></li> </ul> </div> </div> @@ -630,7 +634,7 @@ <h2 class="hasAnchor"> <a href="#new-features-2" class="anchor"></a>New features</h2> <ul> -<li><p>Add the convenience function <code><a href="../reference/mkinsub.html">mkinsub()</a></code> for creating the lists used in <code><a href="../reference/mkinmod.html">mkinmod()</a></code></p></li> +<li><p>Add the convenience function <code><a href="../reference/mkinmod.html">mkinsub()</a></code> for creating the lists used in <code><a href="../reference/mkinmod.html">mkinmod()</a></code></p></li> <li><p>Add the possibility to fit indeterminate order rate equation (IORE) models using an analytical solution (parent only) or a numeric solution. Paths from IORE compounds to metabolites are supported when using formation fractions (use_of_ff = ‘max’). Note that the numerical solution (method.ode = ‘deSolve’) of the IORE differential equations sometimes fails due to numerical problems.</p></li> <li><p>Switch to using the Port algorithm (using a model/trust region approach) per default. While needing more iterations than the Levenberg-Marquardt algorithm previously used per default, it is less sensitive to starting parameters.</p></li> </ul> |