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authorJohannes Ranke <jranke@uni-bremen.de>2023-02-13 05:19:08 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2023-02-13 05:19:08 +0100
commit8d1a84ac2190538ed3bac53a303064e281595868 (patch)
treeacb894d85ab7ec87c4911c355a5264a77e08e34b /docs/dev/reference/create_deg_func.html
parent51d63256a7b3020ee11931d61b4db97b9ded02c0 (diff)
parent4200e566ad2600f56bc3987669aeab88582139eb (diff)
Merge branch 'main' into custom_lsoda_call
Diffstat (limited to 'docs/dev/reference/create_deg_func.html')
-rw-r--r--docs/dev/reference/create_deg_func.html20
1 files changed, 13 insertions, 7 deletions
diff --git a/docs/dev/reference/create_deg_func.html b/docs/dev/reference/create_deg_func.html
index 5d5870fe..e2a42873 100644
--- a/docs/dev/reference/create_deg_func.html
+++ b/docs/dev/reference/create_deg_func.html
@@ -17,7 +17,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.1.2</span>
+ <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.2.2</span>
</span>
</div>
@@ -44,19 +44,25 @@
<a href="../articles/web_only/dimethenamid_2018.html">Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models</a>
</li>
<li>
- <a href="../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a>
+ <a href="../articles/web_only/multistart.html">Short demo of the multistart method</a>
</li>
<li>
<a href="../articles/web_only/compiled_models.html">Performance benefit by using compiled model definitions in mkin</a>
</li>
<li>
+ <a href="../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a>
+ </li>
+ <li>
<a href="../articles/twa.html">Calculation of time weighted average concentrations with mkin</a>
</li>
<li>
<a href="../articles/web_only/NAFTA_examples.html">Example evaluation of NAFTA SOP Attachment examples</a>
</li>
<li>
- <a href="../articles/web_only/benchmarks.html">Some benchmark timings</a>
+ <a href="../articles/web_only/benchmarks.html">Benchmark timings for mkin</a>
+ </li>
+ <li>
+ <a href="../articles/web_only/saem_benchmarks.html">Benchmark timings for saem.mmkin</a>
</li>
</ul></li>
<li>
@@ -125,8 +131,8 @@
<span class="r-in"><span> replications <span class="op">=</span> <span class="fl">2</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Loading required package: rbenchmark</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> test replications elapsed relative user.self sys.self user.child</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 1 analytical 2 0.401 1.000 0.401 0 0</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 2 deSolve 2 0.654 1.631 0.654 0 0</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 1 analytical 2 0.458 1.000 0.458 0 0</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 2 deSolve 2 0.713 1.557 0.713 0 0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> sys.child</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 0</span>
@@ -139,8 +145,8 @@
<span class="r-in"><span> deSolve <span class="op">=</span> <span class="fu"><a href="mkinfit.html">mkinfit</a></span><span class="op">(</span><span class="va">DFOP_SFO</span>, <span class="va">FOCUS_D</span>, solution_type <span class="op">=</span> <span class="st">"deSolve"</span>, quiet <span class="op">=</span> <span class="cn">TRUE</span><span class="op">)</span>,</span></span>
<span class="r-in"><span> replications <span class="op">=</span> <span class="fl">2</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> test replications elapsed relative user.self sys.self user.child</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 1 analytical 2 0.843 1.000 0.843 0 0</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 2 deSolve 2 1.445 1.714 1.445 0 0</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 1 analytical 2 0.884 1.000 0.883 0.000 0</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 2 deSolve 2 1.526 1.726 1.522 0.004 0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> sys.child</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1 0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2 0</span>

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