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authorJohannes Ranke <jranke@uni-bremen.de>2022-08-10 16:04:48 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2022-08-10 16:04:48 +0200
commitfcef764f3688b01a4c6e92915ed68c5e54bc165f (patch)
tree7d5f0b43485d2e99e1e0ea999d0ce47b6914839d /docs/dev/reference/mean_degparms.html
parentbc8ce24677e953e003f7904564b7767537e01ca2 (diff)
parent6178249bbb5e9de7cb7f34287ee7de28a68fed6c (diff)
Merge branch 'v1.1.2'
Diffstat (limited to 'docs/dev/reference/mean_degparms.html')
-rw-r--r--docs/dev/reference/mean_degparms.html34
1 files changed, 29 insertions, 5 deletions
diff --git a/docs/dev/reference/mean_degparms.html b/docs/dev/reference/mean_degparms.html
index d348fa74..67db1868 100644
--- a/docs/dev/reference/mean_degparms.html
+++ b/docs/dev/reference/mean_degparms.html
@@ -17,7 +17,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.1.0</span>
+ <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.1.2</span>
</span>
</div>
@@ -26,7 +26,7 @@
<a href="../reference/index.html">Functions and data</a>
</li>
<li class="dropdown">
- <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
+ <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" data-bs-toggle="dropdown" aria-expanded="false">
Articles
<span class="caret"></span>
@@ -41,6 +41,9 @@
<a href="../articles/FOCUS_L.html">Example evaluation of FOCUS Laboratory Data L1 to L3</a>
</li>
<li>
+ <a href="../articles/web_only/dimethenamid_2018.html">Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models</a>
+ </li>
+ <li>
<a href="../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a>
</li>
<li>
@@ -84,26 +87,47 @@
</div>
<div id="ref-usage">
- <div class="sourceCode"><pre class="sourceCode r"><code><span class="fu">mean_degparms</span><span class="op">(</span><span class="va">object</span>, random <span class="op">=</span> <span class="cn">FALSE</span>, test_log_parms <span class="op">=</span> <span class="cn">FALSE</span>, conf.level <span class="op">=</span> <span class="fl">0.6</span><span class="op">)</span></code></pre></div>
+ <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">mean_degparms</span><span class="op">(</span></span>
+<span> <span class="va">object</span>,</span>
+<span> random <span class="op">=</span> <span class="cn">FALSE</span>,</span>
+<span> test_log_parms <span class="op">=</span> <span class="cn">FALSE</span>,</span>
+<span> conf.level <span class="op">=</span> <span class="fl">0.6</span>,</span>
+<span> default_log_parms <span class="op">=</span> <span class="cn">NA</span></span>
+<span><span class="op">)</span></span></code></pre></div>
</div>
<div id="arguments">
<h2>Arguments</h2>
<dl><dt>object</dt>
<dd><p>An mmkin row object containing several fits of the same model to different datasets</p></dd>
+
+
<dt>random</dt>
<dd><p>Should a list with fixed and random effects be returned?</p></dd>
+
+
<dt>test_log_parms</dt>
<dd><p>If TRUE, log parameters are only considered in
the mean calculations if their untransformed counterparts (most likely
rate constants) pass the t-test for significant difference from zero.</p></dd>
+
+
<dt>conf.level</dt>
<dd><p>Possibility to adjust the required confidence level
for parameter that are tested if requested by 'test_log_parms'.</p></dd>
+
+
+<dt>default_log_parms</dt>
+<dd><p>If set to a numeric value, this is used
+as a default value for the tested log parameters that failed the
+t-test.</p></dd>
+
</dl></div>
<div id="value">
<h2>Value</h2>
- <p>If random is FALSE (default), a named vector containing mean values
+
+
+<p>If random is FALSE (default), a named vector containing mean values
of the fitted degradation model parameters. If random is TRUE, a list with
fixed and random effects, in the format required by the start argument of
nlme for the case of a single grouping variable ds.</p>
@@ -121,7 +145,7 @@ nlme for the case of a single grouping variable ds.</p>
</div>
<div class="pkgdown">
- <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.2.</p>
+ <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p>
</div>
</footer></div>

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