Prepare for v1.0.0v1.0.0

- Improve authorship and copyright information
- Prepare pkgdown config
- Remove dependence on saemix as we need the development version which
is not ready for CRAN
- Temporarily remove saemix interface to check code coverage of the rest

1 files changed, 26 insertions, 20 deletions

diff --git a/docs/reference/CAKE_export.html b/docs/reference/CAKE_export.html
index 4e456651..dcccca1b 100644
--- a/docs/reference/CAKE_export.html
+++ b/docs/reference/CAKE_export.html
@@ -73,7 +73,7 @@ specified as well." />
       </button>
       <span class="navbar-brand">
         <a class="navbar-link" href="../index.html">mkin</a>
-        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.50.2</span>
+        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>
       </span>
     </div>
 
@@ -110,6 +110,9 @@ specified as well." />
     <li>
       <a href="../articles/web_only/NAFTA_examples.html">Example evaluation of NAFTA SOP Attachment examples</a>
     </li>
+    <li>
+      <a href="../articles/web_only/benchmarks.html">Some benchmark timings</a>
+    </li>
   </ul>
 </li>
 <li>
@@ -118,8 +121,8 @@ specified as well." />
       </ul>
       <ul class="nav navbar-nav navbar-right">
         <li>
-  <a href="http://github.com/jranke/mkin/">
-    <span class="fab fa fab fa-github fa-lg"></span>
+  <a href="https://github.com/jranke/mkin/">
+    <span class="fab fa-github fa-lg"></span>
      
   </a>
 </li>
@@ -137,7 +140,7 @@ specified as well." />
   <div class="col-md-9 contents">
     <div class="page-header">
     <h1>Export a list of datasets format to a CAKE study file</h1>
-    <small class="dont-index">Source: <a href='http://github.com/jranke/mkin/blob/master/R/CAKE_export.R'><code>R/CAKE_export.R</code></a></small>
+    <small class="dont-index">Source: <a href='https://github.com/jranke/mkin/blob/master/R/CAKE_export.R'><code>R/CAKE_export.R</code></a></small>
     <div class="hidden name"><code>CAKE_export.Rd</code></div>
     </div>
 
@@ -146,21 +149,21 @@ specified as well." />
 specified as well.</p>
     </div>
 
-    <pre class="usage"><span class='fu'>CAKE_export</span>(
-  <span class='no'>ds</span>,
-  <span class='kw'>map</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='st'>"Parent"</span>),
-  <span class='kw'>links</span> <span class='kw'>=</span> <span class='fl'>NA</span>,
-  <span class='kw'>filename</span> <span class='kw'>=</span> <span class='st'>"CAKE_export.csf"</span>,
-  <span class='kw'>path</span> <span class='kw'>=</span> <span class='st'>"."</span>,
-  <span class='kw'>overwrite</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>,
-  <span class='kw'>study</span> <span class='kw'>=</span> <span class='st'>"Codlemone aerobic soil degradation"</span>,
-  <span class='kw'>description</span> <span class='kw'>=</span> <span class='st'>""</span>,
-  <span class='kw'>time_unit</span> <span class='kw'>=</span> <span class='st'>"days"</span>,
-  <span class='kw'>res_unit</span> <span class='kw'>=</span> <span class='st'>"% AR"</span>,
-  <span class='kw'>comment</span> <span class='kw'>=</span> <span class='st'>"Created using mkin::CAKE_export"</span>,
-  <span class='kw'>date</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/Sys.time.html'>Sys.Date</a></span>(),
-  <span class='kw'>optimiser</span> <span class='kw'>=</span> <span class='st'>"IRLS"</span>
-)</pre>
+    <pre class="usage"><span class='fu'>CAKE_export</span><span class='op'>(</span>
+  <span class='va'>ds</span>,
+  map <span class='op'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/c.html'>c</a></span><span class='op'>(</span>parent <span class='op'>=</span> <span class='st'>"Parent"</span><span class='op'>)</span>,
+  links <span class='op'>=</span> <span class='cn'>NA</span>,
+  filename <span class='op'>=</span> <span class='st'>"CAKE_export.csf"</span>,
+  path <span class='op'>=</span> <span class='st'>"."</span>,
+  overwrite <span class='op'>=</span> <span class='cn'>FALSE</span>,
+  study <span class='op'>=</span> <span class='st'>"Codlemone aerobic soil degradation"</span>,
+  description <span class='op'>=</span> <span class='st'>""</span>,
+  time_unit <span class='op'>=</span> <span class='st'>"days"</span>,
+  res_unit <span class='op'>=</span> <span class='st'>"% AR"</span>,
+  comment <span class='op'>=</span> <span class='st'>"Created using mkin::CAKE_export"</span>,
+  date <span class='op'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/Sys.time.html'>Sys.Date</a></span><span class='op'>(</span><span class='op'>)</span>,
+  optimiser <span class='op'>=</span> <span class='st'>"IRLS"</span>
+<span class='op'>)</span></pre>
 
     <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
     <table class="ref-arguments">
@@ -227,6 +230,9 @@ compatible with CAKE.</p></td>
     <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
 
     <p>The function is called for its side effect.</p>
+    <h2 class="hasAnchor" id="author"><a class="anchor" href="#author"></a>Author</h2>
+
+    <p>Johannes Ranke</p>
 
   </div>
   <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
@@ -243,7 +249,7 @@ compatible with CAKE.</p></td>
 </div>
 
 <div class="pkgdown">
-  <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.5.1.</p>
+  <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.6.1.</p>
 </div>
 
       </footer>