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| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-04-15 20:42:29 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-04-15 20:42:29 +0200 |
| commit | d518c4cfa22994db5ba81a6b01c6cb4c4186872e (patch) | |
| tree | cc5cfb591981d46f084ad4c0d21e548b5b4c1be6 /docs/reference/endpoints.html | |
| parent | 42171ba55222383a0d47e5aacd46a972819e7812 (diff) | |
Adapt endpoint() to also work for nlme.mmkin objects
Diffstat (limited to 'docs/reference/endpoints.html')
| -rw-r--r-- | docs/reference/endpoints.html | 29 |
1 files changed, 22 insertions, 7 deletions
diff --git a/docs/reference/endpoints.html b/docs/reference/endpoints.html index 68af5fcf..ef38c521 100644 --- a/docs/reference/endpoints.html +++ b/docs/reference/endpoints.html @@ -154,13 +154,17 @@ advantage that the SFORB model can also be used for metabolites.</p> <colgroup><col class="name" /><col class="desc" /></colgroup> <tr> <th>fit</th> - <td><p>An object of class <code><a href='mkinfit.html'>mkinfit</a></code>.</p></td> + <td><p>An object of class <code><a href='mkinfit.html'>mkinfit</a></code> or +<code><a href='nlme.mmkin.html'>nlme.mmkin</a></code></p></td> </tr> </table> <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2> - <p>A list with the components mentioned above.</p> + <p>A list with a matrix of dissipation times named distimes, + and, if applicable, a vector of formation fractions named ff + and, if the SFORB model was in use, a vector of eigenvalues + of these SFORB models, equivalent to DFOP rate constants</p> <h2 class="hasAnchor" id="note"><a class="anchor" href="#note"></a>Note</h2> <p>The function is used internally by <code><a href='summary.mkinfit.html'>summary.mkinfit</a></code>.</p> @@ -168,13 +172,24 @@ advantage that the SFORB model can also be used for metabolites.</p> <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> <pre class="examples"><div class='input'> <span class='no'>fit</span> <span class='kw'><-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='st'>"FOMC"</span>, <span class='no'>FOCUS_2006_C</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) - <span class='fu'>endpoints</span>(<span class='no'>fit</span>)</div><div class='output co'>#> $ff -#> logical(0) -#> -#> $distimes + <span class='fu'>endpoints</span>(<span class='no'>fit</span>)</div><div class='output co'>#> $distimes #> DT50 DT90 DT50back #> parent 1.785233 15.1479 4.559973 -#> </div><div class='input'> +#> </div><div class='input'> <span class='co'># \dontrun{</span> + <span class='no'>fit_2</span> <span class='kw'><-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='st'>"SFORB"</span>, <span class='no'>FOCUS_2006_C</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) + <span class='fu'>endpoints</span>(<span class='no'>fit_2</span>)</div><div class='output co'>#> $ff +#> parent_free_sink +#> 1 +#> +#> $SFORB +#> parent_b1 parent_b2 +#> 0.4595574 0.0178488 +#> +#> $distimes +#> DT50 DT90 DT50_parent_b1 DT50_parent_b2 +#> parent 1.886925 21.25106 1.508293 38.83438 +#> </div><div class='input'> # } + </div></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> |