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authorJohannes Ranke <jranke@uni-bremen.de>2018-03-21 18:16:52 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2018-03-21 18:16:52 +0100
commit6ea7bc3614b9a303f7c38dd63b9f80b8d0ebd95e (patch)
treec8d79386f9f01c8ddfe218435860d997ba6af01a /docs/reference/mkinfit.html
parentb88bc151196d66d876fbc11059fc8cd365ef5534 (diff)
Static documentation rebuilt by pkgdown
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diff --git a/docs/reference/mkinfit.html b/docs/reference/mkinfit.html
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@@ -413,16 +413,16 @@
<pre class="examples"><div class='input'><span class='co'># Use shorthand notation for parent only degradation</span>
<span class='no'>fit</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinfit</span>(<span class='st'>"FOMC"</span>, <span class='no'>FOCUS_2006_C</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
<span class='fu'>summary</span>(<span class='no'>fit</span>)</div><div class='output co'>#&gt; mkin version used for fitting: 0.9.47.1
-#&gt; R version used for fitting: 3.4.3
-#&gt; Date of fit: Sun Mar 11 22:10:32 2018
-#&gt; Date of summary: Sun Mar 11 22:10:32 2018
+#&gt; R version used for fitting: 3.4.4
+#&gt; Date of fit: Wed Mar 21 18:14:33 2018
+#&gt; Date of summary: Wed Mar 21 18:14:33 2018
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent
#&gt;
#&gt; Model predictions using solution type analytical
#&gt;
-#&gt; Fitted with method Port using 64 model solutions performed in 0.135 s
+#&gt; Fitted with method Port using 64 model solutions performed in 0.14 s
#&gt;
#&gt; Weighting: none
#&gt;
@@ -491,7 +491,7 @@
<span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>))</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div><div class='input'><span class='co'># Fit the model to the FOCUS example dataset D using defaults</span>
<span class='fu'>print</span>(<span class='fu'>system.time</span>(<span class='no'>fit</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinfit</span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_D</span>,
<span class='kw'>solution_type</span> <span class='kw'>=</span> <span class='st'>"eigen"</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)))</div><div class='output co'>#&gt; user system elapsed
-#&gt; 0.829 0.000 0.829 </div><div class='input'><span class='fu'>coef</span>(<span class='no'>fit</span>)</div><div class='output co'>#&gt; parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink
+#&gt; 0.834 0.000 0.835 </div><div class='input'><span class='fu'>coef</span>(<span class='no'>fit</span>)</div><div class='output co'>#&gt; parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink
#&gt; 99.59848 -3.03822 -2.98030 -5.24750 </div><div class='input'><span class='fu'><a href='endpoints.html'>endpoints</a></span>(<span class='no'>fit</span>)</div><div class='output co'>#&gt; $ff
#&gt; parent_sink parent_m1 m1_sink
#&gt; 0.485524 0.514476 1.000000

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