Static documentation rebuilt by pkgdown

1 files changed, 22 insertions, 23 deletions

diff --git a/docs/reference/mkinsub.html b/docs/reference/mkinsub.html
index 1523138c..e38c153c 100644
--- a/docs/reference/mkinsub.html
+++ b/docs/reference/mkinsub.html
@@ -8,11 +8,13 @@
 
 <title>Function to set up a kinetic submodel for one state variable — mkinsub • mkin</title>
 
+
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+
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@@ -32,14 +34,15 @@
 
 
 
-<meta property="og:title" content="Function to set up a kinetic submodel for one state variable — mkinsub" />
 
+<meta property="og:title" content="Function to set up a kinetic submodel for one state variable — mkinsub" />
 <meta property="og:description" content="This is a convenience function to set up the lists used as arguments for
-  mkinmod." />
+mkinmod." />
 <meta name="twitter:card" content="summary" />
 
 
 
+
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@@ -110,7 +113,6 @@
   <a href="../news/index.html">News</a>
 </li>
       </ul>
-      
       <ul class="nav navbar-nav navbar-right">
         
       </ul>
@@ -132,48 +134,46 @@
     </div>
 
     <div class="ref-description">
-    
     <p>This is a convenience function to set up the lists used as arguments for
-  <code><a href='mkinmod.html'>mkinmod</a></code>.</p>
-    
+<code><a href='mkinmod.html'>mkinmod</a></code>.</p>
     </div>
 
     <pre class="usage"><span class='fu'>mkinsub</span>(<span class='no'>submodel</span>, <span class='kw'>to</span> <span class='kw'>=</span> <span class='kw'>NULL</span>, <span class='kw'>sink</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>, <span class='kw'>full_name</span> <span class='kw'>=</span> <span class='fl'>NA</span>)</pre>
-    
+
     <h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
     <table class="ref-arguments">
     <colgroup><col class="name" /><col class="desc" /></colgroup>
     <tr>
       <th>submodel</th>
-      <td><p>Character vector of length one to specify the submodel type. See
-    <code><a href='mkinmod.html'>mkinmod</a></code> for the list of allowed submodel names.</p></td>
+      <td><p>Character vector of length one to specify the submodel type.
+See <code><a href='mkinmod.html'>mkinmod</a></code> for the list of allowed submodel names.</p></td>
     </tr>
     <tr>
       <th>to</th>
-      <td><p>Vector of the names of the state variable to which a transformation
-    shall be included in the model.</p></td>
+      <td><p>Vector of the names of the state variable to which a
+transformation shall be included in the model.</p></td>
     </tr>
     <tr>
       <th>sink</th>
-      <td><p>Should a pathway to sink be included in the model in addition to the
-    pathways to other state variables?</p></td>
+      <td><p>Should a pathway to sink be included in the model in addition to
+the pathways to other state variables?</p></td>
     </tr>
     <tr>
       <th>full_name</th>
-      <td><p>An optional name to be used e.g. for plotting fits performed with the model.
-    You can use non-ASCII characters here, but then your R code will not be
-    portable, <em>i.e.</em> may produce unintended plot results on other
-    operating systems or system configurations.</p></td>
+      <td><p>An optional name to be used e.g. for plotting fits
+performed with the model.  You can use non-ASCII characters here, but then
+your R code will not be portable, <em>i.e.</em> may produce unintended plot
+results on other operating systems or system configurations.</p></td>
     </tr>
     </table>
-    
+
     <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
 
     <p>A list for use with <code><a href='mkinmod.html'>mkinmod</a></code>.</p>
-    
 
     <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
-    <pre class="examples"><div class='input'><span class='co'># One parent compound, one metabolite, both single first order.</span>
+    <pre class="examples"><div class='input'>
+<span class='co'># One parent compound, one metabolite, both single first order.</span>
 <span class='no'>SFO_SFO</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(
   <span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/list.html'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>, <span class='kw'>to</span> <span class='kw'>=</span> <span class='st'>"m1"</span>),
   <span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'><a href='https://rdrr.io/r/base/list.html'>list</a></span>(<span class='kw'>type</span> <span class='kw'>=</span> <span class='st'>"SFO"</span>))</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div><div class='input'>
@@ -184,15 +184,14 @@
 <span class='co'># Now supplying full names</span>
 <span class='no'>SFO_SFO.2</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(
   <span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'>mkinsub</span>(<span class='st'>"SFO"</span>, <span class='st'>"m1"</span>, <span class='kw'>full_name</span> <span class='kw'>=</span> <span class='st'>"Test compound"</span>),
-  <span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'>mkinsub</span>(<span class='st'>"SFO"</span>, <span class='kw'>full_name</span> <span class='kw'>=</span> <span class='st'>"Metabolite M1"</span>))</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div></pre>
+  <span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'>mkinsub</span>(<span class='st'>"SFO"</span>, <span class='kw'>full_name</span> <span class='kw'>=</span> <span class='st'>"Metabolite M1"</span>))</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div><div class='input'>
+</div></pre>
   </div>
   <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
     <h2>Contents</h2>
     <ul class="nav nav-pills nav-stacked">
       <li><a href="#arguments">Arguments</a></li>
-      
       <li><a href="#value">Value</a></li>
-      
       <li><a href="#examples">Examples</a></li>
     </ul>