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authorJohannes Ranke <jranke@uni-bremen.de>2019-11-01 15:34:28 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2019-11-01 15:34:28 +0100
commitce73c044b949154e3bc3e715b9b79e1360b3f794 (patch)
tree28f477a3142f1efa463a8d8569f924b9064e8637 /docs/reference/parms.html
parente7c65ee913d4a84da0957d2ebb89abfbc444de56 (diff)
Make the 'quadratic' the default for 'confint'
Also the documentation was improved here and there
Diffstat (limited to 'docs/reference/parms.html')
-rw-r--r--docs/reference/parms.html19
1 files changed, 18 insertions, 1 deletions
diff --git a/docs/reference/parms.html b/docs/reference/parms.html
index 8ab26240..e3c52c53 100644
--- a/docs/reference/parms.html
+++ b/docs/reference/parms.html
@@ -71,7 +71,7 @@ considering the error structure that was assumed for the fit." />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.49.6</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.49.8</span>
</span>
</div>
@@ -167,12 +167,29 @@ as used internally during the optimisation?</p></td>
<p>A numeric vector of fitted model parameters</p>
+ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
+ <pre class="examples"><div class='input'><span class='no'>fit</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='st'>"SFO"</span>, <span class='no'>FOCUS_2006_C</span>)</div><div class='output co'>#&gt; <span class='message'>Ordinary least squares optimisation</span></div><div class='output co'>#&gt; Sum of squared residuals at call 1: 2388.077
+#&gt; Sum of squared residuals at call 3: 2388.077
+#&gt; Sum of squared residuals at call 4: 247.1962
+#&gt; Sum of squared residuals at call 7: 200.6791
+#&gt; Sum of squared residuals at call 10: 197.7231
+#&gt; Sum of squared residuals at call 11: 197.0872
+#&gt; Sum of squared residuals at call 14: 196.535
+#&gt; Sum of squared residuals at call 15: 196.535
+#&gt; Sum of squared residuals at call 16: 196.535
+#&gt; Sum of squared residuals at call 17: 196.5334
+#&gt; Sum of squared residuals at call 20: 196.5334
+#&gt; Sum of squared residuals at call 25: 196.5334
+#&gt; Negative log-likelihood at call 31: 26.64668</div><div class='output co'>#&gt; <span class='message'>Optimisation successfully terminated.</span></div><div class='input'><span class='fu'>parms</span>(<span class='no'>fit</span>)</div><div class='output co'>#&gt; parent_0 k_parent_sink sigma
+#&gt; 82.4921598 0.3060633 4.6730124 </div><div class='input'><span class='fu'>parms</span>(<span class='no'>fit</span>, <span class='kw'>transformed</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)</div><div class='output co'>#&gt; parent_0 log_k_parent_sink sigma
+#&gt; 82.492160 -1.183963 4.673012 </div></pre>
</div>
<div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#arguments">Arguments</a></li>
<li><a href="#value">Value</a></li>
+ <li><a href="#examples">Examples</a></li>
</ul>
</div>

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