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authorJohannes Ranke <jranke@uni-bremen.de>2016-11-18 16:48:21 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2016-11-18 16:48:21 +0100
commit30f55769fe2f042c7753144051dd34eec3596adc (patch)
tree86d144b088004bde272ea70d71436478083f08fc /docs/reference/transform_odeparms.html
parentcd5499cb7419b23737c8fdaa47f1606ba9a9aff2 (diff)
Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE)
Again with the jranke branch of jranke/pkgdown
Diffstat (limited to 'docs/reference/transform_odeparms.html')
-rw-r--r--docs/reference/transform_odeparms.html51
1 files changed, 33 insertions, 18 deletions
diff --git a/docs/reference/transform_odeparms.html b/docs/reference/transform_odeparms.html
index 2aff0468..08d4c46a 100644
--- a/docs/reference/transform_odeparms.html
+++ b/docs/reference/transform_odeparms.html
@@ -49,13 +49,28 @@
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li>
- <a href="../reference/index.html">Reference</a>
+ <a href="../reference/index.html">Function reference</a>
</li>
-<li>
- <a href="../articles/index.html">Articles</a>
-</li>
-<li>
- <a href="../news/index.html">News</a>
+<li class="dropdown">
+ <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
+ Articles
+
+ <span class="caret"></span>
+ </a>
+ <ul class="dropdown-menu" role="menu">
+ <li>
+ <a href="../articles/mkin.html">Introduction to mkin</a>
+ </li>
+ <li>
+ <a href="../articles/FOCUS_D.html">Example evaluation of FOCUS Example Dataset D</a>
+ </li>
+ <li>
+ <a href="../articles/FOCUS_L.html">Example evaluation of FOCUS Laboratory Data L1 to L3</a>
+ </li>
+ <li>
+ <a href="../articles/compiled_models.html">Performance benefit by using compiled model definitions in mkin</a>
+ </li>
+ </ul>
</li>
</ul>
@@ -149,8 +164,8 @@
<span class='no'>fit</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
<span class='fu'>summary</span>(<span class='no'>fit</span>, <span class='kw'>data</span><span class='kw'>=</span><span class='fl'>FALSE</span>) <span class='co'># See transformed and backtransformed parameters</span></div><div class='output co'>#&gt; mkin version: 0.9.44.9000
#&gt; R version: 3.3.2
-#&gt; Date of fit: Fri Nov 18 16:24:02 2016
-#&gt; Date of summary: Fri Nov 18 16:24:02 2016
+#&gt; Date of fit: Fri Nov 18 16:46:54 2016
+#&gt; Date of summary: Fri Nov 18 16:46:54 2016
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -158,7 +173,7 @@
#&gt;
#&gt; Model predictions using solution type deSolve
#&gt;
-#&gt; Fitted with method Port using 153 model solutions performed in 0.708 s
+#&gt; Fitted with method Port using 153 model solutions performed in 0.607 s
#&gt;
#&gt; Weighting: none
#&gt;
@@ -226,8 +241,8 @@
<span class='no'>fit.2</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>transform_rates</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
<span class='fu'>summary</span>(<span class='no'>fit.2</span>, <span class='kw'>data</span><span class='kw'>=</span><span class='fl'>FALSE</span>)</div><div class='output co'>#&gt; mkin version: 0.9.44.9000
#&gt; R version: 3.3.2
-#&gt; Date of fit: Fri Nov 18 16:24:03 2016
-#&gt; Date of summary: Fri Nov 18 16:24:03 2016
+#&gt; Date of fit: Fri Nov 18 16:46:55 2016
+#&gt; Date of summary: Fri Nov 18 16:46:55 2016
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - k_parent_sink * parent - k_parent_m1 * parent
@@ -235,7 +250,7 @@
#&gt;
#&gt; Model predictions using solution type deSolve
#&gt;
-#&gt; Fitted with method Port using 327 model solutions performed in 1.341 s
+#&gt; Fitted with method Port using 327 model solutions performed in 1.34 s
#&gt;
#&gt; Weighting: none
#&gt;
@@ -316,8 +331,8 @@
<span class='no'>fit.ff</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO.ff</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
<span class='fu'>summary</span>(<span class='no'>fit.ff</span>, <span class='kw'>data</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>)</div><div class='output co'>#&gt; mkin version: 0.9.44.9000
#&gt; R version: 3.3.2
-#&gt; Date of fit: Fri Nov 18 16:24:04 2016
-#&gt; Date of summary: Fri Nov 18 16:24:04 2016
+#&gt; Date of fit: Fri Nov 18 16:46:56 2016
+#&gt; Date of summary: Fri Nov 18 16:46:56 2016
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - k_parent * parent
@@ -325,7 +340,7 @@
#&gt;
#&gt; Model predictions using solution type deSolve
#&gt;
-#&gt; Fitted with method Port using 185 model solutions performed in 0.756 s
+#&gt; Fitted with method Port using 185 model solutions performed in 0.764 s
#&gt;
#&gt; Weighting: none
#&gt;
@@ -400,8 +415,8 @@
<span class='no'>fit.ff.2</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO.ff.2</span>, <span class='no'>FOCUS_2006_D</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)
<span class='fu'>summary</span>(<span class='no'>fit.ff.2</span>, <span class='kw'>data</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>)</div><div class='output co'>#&gt; mkin version: 0.9.44.9000
#&gt; R version: 3.3.2
-#&gt; Date of fit: Fri Nov 18 16:24:05 2016
-#&gt; Date of summary: Fri Nov 18 16:24:05 2016
+#&gt; Date of fit: Fri Nov 18 16:46:57 2016
+#&gt; Date of summary: Fri Nov 18 16:46:57 2016
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - k_parent * parent
@@ -409,7 +424,7 @@
#&gt;
#&gt; Model predictions using solution type deSolve
#&gt;
-#&gt; Fitted with method Port using 104 model solutions performed in 0.416 s
+#&gt; Fitted with method Port using 104 model solutions performed in 0.433 s
#&gt;
#&gt; Weighting: none
#&gt;

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