Documentation improvements, mainly fixing example code

The errors in the example code were in the \dontrun sections, so they
were not caught by CRAN checks. In addition, the static help files
generated with pkgdown were cached, so I noticed the errors only
after completely regenerating the documentation for version 1.0.0.

1 files changed, 4 insertions, 4 deletions

diff --git a/man/confint.mkinfit.Rd b/man/confint.mkinfit.Rd
index fd2890ff..b19e78c2 100644
--- a/man/confint.mkinfit.Rd
+++ b/man/confint.mkinfit.Rd
@@ -82,20 +82,20 @@ confint(f, method = "profile")
 if (identical(Sys.getenv("NOT_CRAN"), "true")) {
   n_cores <- parallel::detectCores() - 1
 } else {
- n_cores <- 1
+  n_cores <- 1
 }
 if (Sys.getenv("TRAVIS") != "") n_cores = 1
 if (Sys.info()["sysname"] == "Windows") n_cores = 1
 
-SFO_SFO <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"), quiet = TRUE)
+SFO_SFO <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"),
+  use_of_ff = "min", quiet = TRUE)
 SFO_SFO.ff <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"),
   use_of_ff = "max", quiet = TRUE)
 f_d_1 <- mkinfit(SFO_SFO, subset(FOCUS_2006_D, value != 0), quiet = TRUE)
 system.time(ci_profile <- confint(f_d_1, method = "profile", cores = 1, quiet = TRUE))
 # Using more cores does not save much time here, as parent_0 takes up most of the time
 # If we additionally exclude parent_0 (the confidence of which is often of
-# minor interest), we get a nice performance improvement from about 50
-# seconds to about 12 seconds if we use at least four cores
+# minor interest), we get a nice performance improvement if we use at least 4 cores
 system.time(ci_profile_no_parent_0 <- confint(f_d_1, method = "profile",
   c("k_parent_sink", "k_parent_m1", "k_m1_sink", "sigma"), cores = n_cores))
 ci_profile