Use roxygen for functions and methods

1 files changed, 29 insertions, 23 deletions

diff --git a/man/logistic.solution.Rd b/man/logistic.solution.Rd
index 05b6c0aa..def776aa 100644
--- a/man/logistic.solution.Rd
+++ b/man/logistic.solution.Rd
@@ -1,36 +1,35 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/logistic.solution.R
 \name{logistic.solution}
 \alias{logistic.solution}
-\title{ Logistic kinetics }
-\description{
-  Function describing exponential decline from a defined starting value, with
-  an increasing rate constant, supposedly caused by microbial growth
-}
+\title{Logistic kinetics}
 \usage{
 logistic.solution(t, parent.0, kmax, k0, r)
 }
 \arguments{
-  \item{t}{ Time. }
-  \item{parent.0}{ Starting value for the response variable at time zero. }
-  \item{kmax}{ Maximum rate constant. }
-  \item{k0}{ Minumum rate constant effective at time zero. }
-  \item{r}{ Growth rate of the increase in the rate constant. }
-}
-\note{
-  The solution of the logistic model reduces to the
-  \code{\link{SFO.solution}} if \code{k0} is equal to
-  \code{kmax}.
+\item{t}{Time.}
+
+\item{parent.0}{Starting value for the response variable at time zero.}
+
+\item{kmax}{Maximum rate constant.}
+
+\item{k0}{Minumum rate constant effective at time zero.}
+
+\item{r}{Growth rate of the increase in the rate constant.}
 }
 \value{
-  The value of the response variable at time \code{t}.
+The value of the response variable at time \code{t}.
 }
-\references{
-  FOCUS (2014) \dQuote{Generic guidance for Estimating Persistence and
-  Degradation Kinetics from Environmental Fate Studies on Pesticides in EU
-  Registration} Report of the FOCUS Work Group on Degradation Kinetics,
-  Version 1.1, 18 December 2014
-  \url{http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics}
+\description{
+Function describing exponential decline from a defined starting value, with
+an increasing rate constant, supposedly caused by microbial growth
+}
+\note{
+The solution of the logistic model reduces to the
+  \code{\link{SFO.solution}} if \code{k0} is equal to \code{kmax}.
 }
 \examples{
+
   # Reproduce the plot on page 57 of FOCUS (2014)
   plot(function(x) logistic.solution(x, 100, 0.08, 0.0001, 0.2),
        from = 0, to = 100, ylim = c(0, 100),
@@ -64,5 +63,12 @@ logistic.solution(t, parent.0, kmax, k0, r)
   plot_sep(m)
   summary(m)$bpar
   endpoints(m)$distimes
+
+}
+\references{
+FOCUS (2014) \dQuote{Generic guidance for Estimating Persistence
+  and Degradation Kinetics from Environmental Fate Studies on Pesticides in
+  EU Registration} Report of the FOCUS Work Group on Degradation Kinetics,
+  Version 1.1, 18 December 2014
+  \url{http://esdac.jrc.ec.europa.eu/projects/degradation-kinetics}
 }
-\keyword{ manip }