Adapt tests, vignettes and examples

- Write the NEWS
- Static documentation rebuilt by pkgdown
- Adapt mkinerrmin
- Fix (hopefully all) remaining problems in mkinfit

1 files changed, 3 insertions, 3 deletions

diff --git a/man/mccall81_245T.Rd b/man/mccall81_245T.Rd
index 22368d6d..00a05781 100644
--- a/man/mccall81_245T.Rd
+++ b/man/mccall81_245T.Rd
@@ -13,10 +13,10 @@
 \format{

   A dataframe containing the following variables.

   \describe{

-    \item{\code{name}}{the name of the compound observed. Note that T245 is used as 

+    \item{\code{name}}{the name of the compound observed. Note that T245 is used as

                        an acronym for 2,4,5-T. T245 is a legitimate object name

                        in R, which is necessary for specifying models using

-                       \code{\link{mkinmod}}.} 

+                       \code{\link{mkinmod}}.}

     \item{\code{time}}{a numeric vector containing sampling times in days after

                        treatment}

     \item{\code{value}}{a numeric vector containing concentrations in percent of applied radioactivity}

@@ -35,13 +35,13 @@
     fit.1 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"), quiet = TRUE)

     summary(fit.1)$bpar

     endpoints(fit.1)

-    # No convergence, no covariance matrix ...

     # k_phenol_sink is really small, therefore fix it to zero

     fit.2 <- mkinfit(SFO_SFO_SFO, subset(mccall81_245T, soil == "Commerce"),

                    parms.ini = c(k_phenol_sink = 0),

                    fixed_parms = "k_phenol_sink", quiet = TRUE)

     summary(fit.2)$bpar

     endpoints(fit.1)

+    plot_sep(fit.2)

   }

 }

 \keyword{datasets}