diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2015-04-16 10:03:02 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2015-04-16 10:03:02 +0200 |
| commit | 10fb9aac470d87afbe2d4ee9e3d1898bfc3f1aa7 (patch) | |
| tree | a1ee701046f3ccc69a05eb9e5461cf8167e3ddda /man | |
| parent | d34e5c053794a08cc73c9042ccccfb334ae0f62d (diff) | |
| parent | 7f5455e1a49f44a0fa341ee7cca86dfb03e273a2 (diff) | |
Merge branch 'compile_odes'
Diffstat (limited to 'man')
| -rw-r--r-- | man/mkinfit.Rd | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/man/mkinfit.Rd b/man/mkinfit.Rd index 9c82f5ff..4b0ad1a7 100644 --- a/man/mkinfit.Rd +++ b/man/mkinfit.Rd @@ -235,7 +235,8 @@ SFO_SFO <- mkinmod( parent = list(type = "SFO", to = "m1", sink = TRUE), m1 = list(type = "SFO")) # Fit the model to the FOCUS example dataset D using defaults -fit <- mkinfit(SFO_SFO, FOCUS_2006_D) +fit <- mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "eigen") +fit.deSolve <- mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "deSolve") summary(fit) # Use stepwise fitting, using optimised parameters from parent only fit, FOMC @@ -258,10 +259,10 @@ SFORB_SFO <- mkinmod( m1 = list(type = "SFO")) # Fit the model to the FOCUS example dataset D using defaults fit.SFORB_SFO <- mkinfit(SFORB_SFO, FOCUS_2006_D) +fit.SFORB_SFO.deSolve <- mkinfit(SFORB_SFO, FOCUS_2006_D, solution_type = "deSolve") # Use starting parameters from parent only SFORB fit (not really needed in this case) fit.SFORB = mkinfit(SFORB, FOCUS_2006_D) fit.SFORB_SFO <- mkinfit(SFORB_SFO, FOCUS_2006_D, parms.ini = fit.SFORB$bparms.ode) -} # Weighted fits, including IRLS SFO_SFO.ff <- mkinmod(parent = list(type = "SFO", to = "m1"), @@ -275,6 +276,7 @@ summary(f.w.mean) f.w.mean.irls <- mkinfit(SFO_SFO.ff, FOCUS_2006_D, weight = "mean", reweight.method = "obs") summary(f.w.mean.irls) +} \dontrun{ # Manual weighting |