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| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-11-13 21:15:35 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-11-13 21:15:35 +0100 |
| commit | c3700bec3a704660d3ade7a54c56b7084beb02b4 (patch) | |
| tree | 35fe23b6c9e2b3fd5c0bd66e9a4f8b24281302de /test.log | |
| parent | b0e529ff49dfa52568fe7c5e6e76439a83c62840 (diff) | |
Calculate Akaike weights
Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 21 |
1 files changed, 11 insertions, 10 deletions
@@ -1,11 +1,12 @@ Loading mkin Testing mkin ✔ | OK F W S | Context +✔ | 5 | Calculation of Akaike weights ✔ | 2 | Export dataset for reading into CAKE -✔ | 10 | Confidence intervals and p-values [10.1 s] -✔ | 14 | Error model fitting [40.5 s] +✔ | 10 | Confidence intervals and p-values [9.7 s] +✔ | 14 | Error model fitting [36.9 s] ✔ | 4 | Calculation of FOCUS chi2 error levels [2.2 s] -✔ | 13 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.4 s] +✔ | 13 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.3 s] ✔ | 6 | Test fitting the decline of metabolites from their maximum [0.7 s] ✔ | 1 | Fitting the logistic model [0.9 s] ✔ | 1 | Test dataset class mkinds used in gmkin @@ -18,20 +19,20 @@ Testing mkin ✔ | 11 | Plotting [0.6 s] ✔ | 4 | AIC calculation ✔ | 2 | Residuals extracted from mkinfit models -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [5.6 s] -✔ | 4 | Fitting the SFORB model [1.8 s] +✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [5.3 s] +✔ | 4 | Fitting the SFORB model [1.7 s] ✔ | 1 | Summaries of old mkinfit objects -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.5 s] -✔ | 7 1 | Hypothesis tests [34.1 s] +✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [7.2 s] +✔ | 7 1 | Hypothesis tests [32.3 s] ──────────────────────────────────────────────────────────────────────────────── -test_tests.R:59: skip: We can do a likelihood ratio test using an update specification +test_tests.R:60: skip: We can do a likelihood ratio test using an update specification Reason: This errors out if called by testthat while it works in a normal R session ──────────────────────────────────────────────────────────────────────────────── ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 116.9 s +Duration: 110.2 s -OK: 133 +OK: 138 Failed: 0 Warnings: 0 Skipped: 1 |