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| author | Johannes Ranke <jranke@uni-bremen.de> | 2022-07-22 15:29:08 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-07-22 15:29:08 +0200 |
| commit | 96dbf26adfad7f43df3857d12afadf1c25778357 (patch) | |
| tree | 205801eb4a83403a8851b4662c64062885098712 /test_dev.log | |
| parent | cff25a78e0e5a9d46db575b1ae3b02ace560aaf6 (diff) | |
Move logs into own directory to clean root
Diffstat (limited to 'test_dev.log')
| -rw-r--r-- | test_dev.log | 54 |
1 files changed, 0 insertions, 54 deletions
diff --git a/test_dev.log b/test_dev.log deleted file mode 100644 index 24905a1a..00000000 --- a/test_dev.log +++ /dev/null @@ -1,54 +0,0 @@ -ℹ Loading mkin -Loading required package: parallel -ℹ Testing mkin -✔ | F W S OK | Context -✔ | 5 | AIC calculation -✔ | 5 | Analytical solutions for coupled models [14.6s] -✔ | 5 | Calculation of Akaike weights -✔ | 2 | Export dataset for reading into CAKE -✔ | 12 | Confidence intervals and p-values [1.0s] -⠋ | 1 | Dimethenamid data from 2018 -✔ | 1 27 | Dimethenamid data from 2018 [116.1s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_dmta.R:164:3): Different backends get consistent results for SFO-SFO3+, dimethenamid data -Reason: Fitting this ODE model with saemix takes about 15 minutes on my system -──────────────────────────────────────────────────────────────────────────────── -✔ | 14 | Error model fitting [6.6s] -✔ | 5 | Time step normalisation -✔ | 4 | Calculation of FOCUS chi2 error levels [0.8s] -✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [3.5s] -✔ | 4 | Test fitting the decline of metabolites from their maximum [0.6s] -✔ | 1 | Fitting the logistic model [0.3s] -⠋ | 11 | Nonlinear mixed-effects models -✔ | 1 14 | Nonlinear mixed-effects models [1.3s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_mixed.R:68:3): saemix results are reproducible for biphasic fits -Reason: Fitting with saemix takes around 10 minutes when using deSolve -──────────────────────────────────────────────────────────────────────────────── -✔ | 3 | Test dataset classes mkinds and mkindsg -✔ | 10 | Special cases of mkinfit calls [0.6s] -✔ | 3 | mkinfit features [1.1s] -✔ | 8 | mkinmod model generation and printing [0.2s] -✔ | 3 | Model predictions with mkinpredict [0.3s] -✔ | 16 | Evaluations according to 2015 NAFTA guidance [2.1s] -✔ | 9 | Nonlinear mixed-effects models with nlme [8.7s] -✔ | 16 | Plotting [1.4s] -✔ | 4 | Residuals extracted from mkinfit models -✔ | 23 | saemix parent models [28.4s] -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [12.0s] -✔ | 7 | Fitting the SFORB model [16.9s] -✔ | 1 | Summaries of old mkinfit objects -✔ | 4 | Summary [0.1s] -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [18.1s] -✔ | 9 | Hypothesis tests [78.9s] -✔ | 2 | tffm0 -✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.0s] - -══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 315.9 s - -── Skipped tests ────────────────────────────────────────────────────────────── -• Fitting this ODE model with saemix takes about 15 minutes on my system (1) -• Fitting with saemix takes around 10 minutes when using deSolve (1) - -[ FAIL 0 | WARN 0 | SKIP 2 | PASS 240 ] |