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| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-11 15:00:25 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-11 15:01:13 +0200 |
| commit | 0a7820b4063201beb26b78ebfea40e80847c6143 (patch) | |
| tree | f5bd2cde6c325aaa62220ff3c39459d7efd7d7bf /tests/testthat/setup_script.R | |
| parent | b36ae3d710858ee3ff2907eb2d780e0dff48a4f3 (diff) | |
Add analytical solution for DFOP-SFO
This is about twice as fast as deSolve compiled with FOCUS D
Diffstat (limited to 'tests/testthat/setup_script.R')
| -rw-r--r-- | tests/testthat/setup_script.R | 11 |
1 files changed, 7 insertions, 4 deletions
diff --git a/tests/testthat/setup_script.R b/tests/testthat/setup_script.R index 58e328cd..def52697 100644 --- a/tests/testthat/setup_script.R +++ b/tests/testthat/setup_script.R @@ -40,16 +40,19 @@ fits <- mmkin(models, # One metabolite SFO_SFO <- mkinmod(parent = mkinsub("SFO", to = "m1"), - m1 = mkinsub("SFO"), - use_of_ff = "min", quiet = TRUE) + m1 = mkinsub("SFO"), + use_of_ff = "min", quiet = TRUE) SFO_SFO.ff <- mkinmod(parent = mkinsub("SFO", to = "m1"), - m1 = mkinsub("SFO"), - use_of_ff = "max", quiet = TRUE) + m1 = mkinsub("SFO"), + use_of_ff = "max", quiet = TRUE) SFO_SFO.ff.nosink <- mkinmod( parent = mkinsub("SFO", "m1", sink = FALSE), m1 = mkinsub("SFO"), quiet = TRUE, use_of_ff = "max") FOMC_SFO <- mkinmod(parent = mkinsub("FOMC", to = "m1"), m1 = mkinsub("SFO"), quiet = TRUE) +DFOP_SFO <- mkinmod(parent = mkinsub("DFOP", to = "m1"), + m1 = mkinsub("SFO"), + use_of_ff = "max", quiet = TRUE) # Avoid warning when fitting a dataset where zero value is removed FOCUS_D <- subset(FOCUS_2006_D, value != 0) |