diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 18:03:54 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 18:03:54 +0100 |
| commit | 2bb59c88d49b193f278916ad9cc4de83c0de9604 (patch) | |
| tree | f286bba254d7c5f2d32eeb2b11f6148938b0e1e1 /tests/testthat/setup_script.R | |
| parent | 351248d07f810ccb6c497633a02cd48ee35526e6 (diff) | |
Make tests more platform independent, update docs
Diffstat (limited to 'tests/testthat/setup_script.R')
| -rw-r--r-- | tests/testthat/setup_script.R | 5 |
1 files changed, 1 insertions, 4 deletions
diff --git a/tests/testthat/setup_script.R b/tests/testthat/setup_script.R index 4b99ad67..ca0ca313 100644 --- a/tests/testthat/setup_script.R +++ b/tests/testthat/setup_script.R @@ -185,8 +185,7 @@ ds_biphasic <- lapply(ds_biphasic_mean, function(ds) { # Mixed model fits mmkin_sfo_1 <- mmkin("SFO", ds_sfo, quiet = TRUE, error_model = "tc", cores = n_cores) mmkin_dfop_1 <- mmkin("DFOP", ds_dfop, quiet = TRUE, cores = n_cores) -mmkin_biphasic <- mmkin(list("DFOP-SFO" = DFOP_SFO), ds_biphasic, quiet = TRUE, cores = n_cores) -mmkin_biphasic_tc <- mmkin(list("DFOP-SFO" = DFOP_SFO), ds_biphasic, quiet = TRUE, cores = n_cores, +mmkin_biphasic <- mmkin(list("DFOP-SFO" = DFOP_SFO), ds_biphasic, quiet = TRUE, cores = n_cores, error_model = "tc") mmkin_biphasic_mixed <- mixed(mmkin_biphasic) @@ -206,8 +205,6 @@ saem_biphasic_s <- saem(mmkin_biphasic, transformations = "saemix", quiet = TRUE # nlmixr saem tmp <- suppressMessages(capture.output(nlmixr_saem_biphasic <- nlmixr(mmkin_biphasic, est = "saem", control = nlmixr::saemControl(nBurn = 300, nEm = 100, nmc = 9, print = 0)))) -tmp <- suppressMessages(capture.output(nlmixr_saem_biphasic_tc <- nlmixr(mmkin_biphasic_tc, est = "saem", - control = nlmixr::saemControl(nBurn = 300, nEm = 100, nmc = 9, print = 0)))) # The FOCEI fit takes too long... #tmp <- capture_output(nlmixr_focei_biphasic <- nlmixr(mmkin_biphasic, est = "focei", # control = nlmixr::foceiControl(print = 0))) |