Make tests more platform independent, update docs

1 files changed, 0 insertions, 81 deletions

diff --git a/tests/testthat/summary_nlme_biphasic_s.txt b/tests/testthat/summary_nlme_biphasic_s.txt
deleted file mode 100644
index 03ef49a6..00000000
--- a/tests/testthat/summary_nlme_biphasic_s.txt
+++ /dev/null
@@ -1,81 +0,0 @@
-nlme version used for fitting:      Dummy 0.0 for testing 
-mkin version used for pre-fitting:  Dummy 0.0 for testing 
-R version used for fitting:         Dummy R version for testing 
-Date of fit:     Dummy date for testing 
-Date of summary: Dummy date for testing 
-
-Equations:
-d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
-           time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time)))
-           * parent
-d_m1/dt = + f_parent_to_m1 * ((k1 * g * exp(-k1 * time) + k2 * (1 - g)
-           * exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) *
-           exp(-k2 * time))) * parent - k_m1 * m1
-
-Data:
-507 observations of 2 variable(s) grouped in 15 datasets
-
-Model predictions using solution type analytical 
-
-Fitted in test time 0 s using 4 iterations
-
-Variance model: Constant variance 
-
-Mean of starting values for individual parameters:
-       parent_0        log_k_m1 f_parent_qlogis          log_k1          log_k2 
-         100.67           -5.38           -0.09           -2.74           -4.51 
-       g_qlogis 
-          -0.18 
-
-Fixed degradation parameter values:
-     value  type
-m1_0     0 state
-
-Results:
-
-   AIC  BIC logLik
-  2678 2733  -1326
-
-Optimised, transformed parameters with symmetric confidence intervals:
-                lower  est.  upper
-parent_0         99.8 100.7 101.62
-log_k_m1         -5.6  -5.4  -5.25
-f_parent_qlogis  -0.3  -0.1   0.06
-log_k1           -3.0  -2.8  -2.57
-log_k2           -4.7  -4.5  -4.35
-g_qlogis         -0.4  -0.1   0.17
-
-Correlation: 
-                pr_0 l__1 f_p_ lg_1 lg_2
-log_k_m1        -0.2                    
-f_parent_qlogis -0.1  0.4               
-log_k1           0.2  0.0  0.0          
-log_k2           0.1  0.2  0.0  0.4     
-g_qlogis        -0.1 -0.2  0.0 -0.5 -0.6
-
-Random effects:
- Formula: list(parent_0 ~ 1, log_k_m1 ~ 1, f_parent_qlogis ~ 1, log_k1 ~ 1,      log_k2 ~ 1, g_qlogis ~ 1)
- Level: ds
- Structure: Diagonal
-        parent_0 log_k_m1 f_parent_qlogis log_k1 log_k2 g_qlogis Residual
-StdDev:        1     0.03             0.3    0.3    0.2      0.3        3
-
-
-Backtransformed parameters with asymmetric confidence intervals:
-               lower  est. upper
-parent_0       1e+02 1e+02 1e+02
-k_m1           4e-03 4e-03 5e-03
-f_parent_to_m1 4e-01 5e-01 5e-01
-k1             5e-02 6e-02 8e-02
-k2             9e-03 1e-02 1e-02
-g              4e-01 5e-01 5e-01
-
-Resulting formation fractions:
-             ff
-parent_m1   0.5
-parent_sink 0.5
-
-Estimated disappearance times:
-       DT50 DT90 DT50back DT50_k1 DT50_k2
-parent   25  150       45      11      63
-m1      154  512       NA      NA      NA