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| author | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 18:03:54 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-03-02 18:03:54 +0100 |
| commit | 2bb59c88d49b193f278916ad9cc4de83c0de9604 (patch) | |
| tree | f286bba254d7c5f2d32eeb2b11f6148938b0e1e1 /tests/testthat/summary_nlmixr_saem_biphasic.txt | |
| parent | 351248d07f810ccb6c497633a02cd48ee35526e6 (diff) | |
Make tests more platform independent, update docs
Diffstat (limited to 'tests/testthat/summary_nlmixr_saem_biphasic.txt')
| -rw-r--r-- | tests/testthat/summary_nlmixr_saem_biphasic.txt | 62 |
1 files changed, 31 insertions, 31 deletions
diff --git a/tests/testthat/summary_nlmixr_saem_biphasic.txt b/tests/testthat/summary_nlmixr_saem_biphasic.txt index f1cdc47b..144cbac7 100644 --- a/tests/testthat/summary_nlmixr_saem_biphasic.txt +++ b/tests/testthat/summary_nlmixr_saem_biphasic.txt @@ -19,17 +19,17 @@ Degradation model predictions using RxODE Fitted in test time 0 s -Variance model: Constant variance +Variance model: Two-component variance function Mean of starting values for individual parameters: parent_0 log_k_m1 f_parent_qlogis log_k1 log_k2 - 100.67 -5.38 -0.09 -2.74 -4.51 + 100.65 -5.38 -0.09 -2.74 -4.53 g_qlogis - -0.18 + -0.14 Mean of starting values for error model parameters: -sigma_parent sigma_m1 - 3 3 +sigma_low_parent rsd_high_parent sigma_low_m1 rsd_high_m1 + 0.79 0.05 0.79 0.05 Fixed degradation parameter values: None @@ -38,33 +38,33 @@ Results: Likelihood calculated by gauss3_1.6 AIC BIC logLik - 2510 2569 -1241 + 2400 2468 -1184 Optimised parameters: - est. lower upper -parent_0 100.49 99.6 101.37 -log_k_m1 -5.36 -5.5 -5.20 -f_parent_qlogis -0.09 -0.3 0.08 -log_k1 -2.78 -3.0 -2.59 -log_k2 -4.51 -4.7 -4.35 -g_qlogis -0.12 -0.5 0.21 + est. lower upper +parent_0 100.35 99.0 101.7 +log_k_m1 -5.35 -5.5 -5.2 +f_parent_qlogis -0.09 -0.3 0.1 +log_k1 -2.76 -3.0 -2.6 +log_k2 -4.49 -4.6 -4.4 +g_qlogis -0.17 -0.4 0.1 Correlation: pr_0 l__1 f_p_ lg_1 lg_2 -log_k_m1 -0.3 -f_parent_qlogis -0.2 0.3 -log_k1 0.1 0.1 0.0 -log_k2 0.0 0.3 0.1 0.4 -g_qlogis 0.0 -0.3 -0.1 -0.5 -0.7 +log_k_m1 -0.4 +f_parent_qlogis -0.4 0.4 +log_k1 0.2 -0.2 -0.1 +log_k2 0.0 0.1 0.0 0.3 +g_qlogis 0.1 -0.1 0.0 -0.4 -0.5 Random effects (omega): eta.parent_0 eta.log_k_m1 eta.f_parent_qlogis eta.log_k1 -eta.parent_0 0.2 0.00 0.00 0.00 -eta.log_k_m1 0.0 0.05 0.00 0.00 -eta.f_parent_qlogis 0.0 0.00 0.09 0.00 -eta.log_k1 0.0 0.00 0.00 0.09 -eta.log_k2 0.0 0.00 0.00 0.00 -eta.g_qlogis 0.0 0.00 0.00 0.00 +eta.parent_0 0.08 0.00 0.0 0.00 +eta.log_k_m1 0.00 0.02 0.0 0.00 +eta.f_parent_qlogis 0.00 0.00 0.1 0.00 +eta.log_k1 0.00 0.00 0.0 0.09 +eta.log_k2 0.00 0.00 0.0 0.00 +eta.g_qlogis 0.00 0.00 0.0 0.00 eta.log_k2 eta.g_qlogis eta.parent_0 0.00 0.0 eta.log_k_m1 0.00 0.0 @@ -74,17 +74,17 @@ eta.log_k2 0.03 0.0 eta.g_qlogis 0.00 0.1 Variance model: -sigma_parent sigma_m1 - 4 1 +sigma_low_parent rsd_high_parent sigma_low_m1 rsd_high_m1 + 1.04 0.05 0.82 0.06 Backtransformed parameters: est. lower upper parent_0 1e+02 1e+02 1e+02 k_m1 5e-03 4e-03 6e-03 f_parent_to_m1 5e-01 4e-01 5e-01 -k1 6e-02 5e-02 7e-02 -k2 1e-02 9e-03 1e-02 -g 5e-01 4e-01 6e-01 +k1 6e-02 5e-02 8e-02 +k2 1e-02 1e-02 1e-02 +g 5e-01 4e-01 5e-01 Resulting formation fractions: ff @@ -93,5 +93,5 @@ parent_sink 0.5 Estimated disappearance times: DT50 DT90 DT50back DT50_k1 DT50_k2 -parent 25 152 46 11 63 -m1 147 488 NA NA NA +parent 25 150 45 11 61 +m1 145 483 NA NA NA |