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authorJohannes Ranke <jranke@uni-bremen.de>2022-02-08 17:17:29 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2022-02-08 17:17:29 +0100
commit0fa8a770812775d697717ad723f7f61fb04b7fef (patch)
tree17473ddf787541745d47dab063bc643ec59a9557 /tests/testthat/summary_saem_biphasic_s.txt
parentd081384ddcb75a9f92fad33e4e3f6d6796f98e67 (diff)
parentc0638c84568d475b3b059e2c6e593e6f03b846bc (diff)
Merge branch 'nlmixr'
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+saemix version used for fitting: Dummy 0.0 for testing
+mkin version used for pre-fitting: Dummy 0.0 for testing
+R version used for fitting: Dummy R version for testing
+Date of fit: Dummy date for testing
+Date of summary: Dummy date for testing
+
+Equations:
+d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 *
+ time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time)))
+ * parent
+d_m1/dt = + f_parent_to_m1 * ((k1 * g * exp(-k1 * time) + k2 * (1 - g)
+ * exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) *
+ exp(-k2 * time))) * parent - k_m1 * m1
+
+Data:
+507 observations of 2 variable(s) grouped in 15 datasets
+
+Model predictions using solution type analytical
+
+Fitted in test time 0 s using 300, 100 iterations
+
+Variance model: Constant variance
+
+Mean of starting values for individual parameters:
+ parent_0 k_m1 f_parent_to_m1 k1 k2
+ 1.0e+02 4.6e-03 4.8e-01 6.4e-02 1.1e-02
+ g
+ 4.6e-01
+
+Fixed degradation parameter values:
+None
+
+Results:
+
+Likelihood computed by importance sampling
+ AIC BIC logLik
+ 2679 2689 -1327
+
+Optimised parameters:
+ est. lower upper
+parent_0 1.0e+02 1.0e+02 1.0e+02
+k_m1 4.8e-03 4.1e-03 5.5e-03
+f_parent_to_m1 4.8e-01 4.3e-01 5.2e-01
+k1 5.9e-02 4.6e-02 7.2e-02
+k2 1.1e-02 9.0e-03 1.3e-02
+g 4.9e-01 4.3e-01 5.4e-01
+
+Correlation:
+ prnt_0 k_m1 f_p__1 k1 k2
+k_m1 -0.168
+f_parent_to_m1 -0.141 0.379
+k1 0.139 -0.004 -0.024
+k2 0.055 0.154 0.033 0.246
+g -0.078 -0.206 -0.058 -0.435 -0.601
+
+Random effects:
+ est. lower upper
+SD.parent_0 1.1986 0.28 2.12
+SD.k_m1 0.0034 -6.85 6.86
+SD.f_parent_to_m1 0.3369 0.21 0.46
+SD.k1 0.3790 0.24 0.52
+SD.k2 0.2666 0.16 0.37
+SD.g 0.0401 -0.67 0.75
+
+Variance model:
+ est. lower upper
+a.1 2.9 2.7 3
+
+Resulting formation fractions:
+ ff
+parent_m1 0.48
+parent_sink 0.52
+
+Estimated disappearance times:
+ DT50 DT90 DT50back DT50_k1 DT50_k2
+parent 25 150 45 12 64
+m1 145 483 NA NA NA

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