diff options
| author | Johannes Ranke <jranke@uni-bremen.de> | 2022-11-18 19:14:47 +0100 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2022-11-18 19:14:47 +0100 |
| commit | 5364f037a72863ef5ba81e14ba4417f68fd389f9 (patch) | |
| tree | fac84908a74553009b0ab03d7a8c21cdf3a7f086 /tests/testthat/test_plot.R | |
| parent | a14237fc1580b09f8772cd3330b0a445785e48ac (diff) | |
Make mixed model test data permanent to ensure reproducibility
To ensure that tests on different platforms work on the same data, the
mixed modelling test data previosly generated in
tests/testthat/setup_script.R were generated once using the script in
inst/dataset/generation/ds_mixed.R, and are now distributed with the
package.
Diffstat (limited to 'tests/testthat/test_plot.R')
| -rw-r--r-- | tests/testthat/test_plot.R | 22 |
1 files changed, 11 insertions, 11 deletions
diff --git a/tests/testthat/test_plot.R b/tests/testthat/test_plot.R index 13058c00..01b0c1ee 100644 --- a/tests/testthat/test_plot.R +++ b/tests/testthat/test_plot.R @@ -44,24 +44,24 @@ test_that("Plotting mkinfit, mmkin and mixed model objects is reproducible", { f_uba_dfop_sfo_saem <- saem(f_uba_mmkin["DFOP-SFO", ], quiet = TRUE, transformations = "saemix") - plot_biphasic_mmkin <- function() plot(f_uba_dfop_sfo_mixed, pop_curve = TRUE) - vdiffr::expect_doppelganger("mixed model fit for mmkin object", plot_biphasic_mmkin) + plot_dfop_sfo_mmkin <- function() plot(f_uba_dfop_sfo_mixed, pop_curve = TRUE) + vdiffr::expect_doppelganger("mixed model fit for mmkin object", plot_dfop_sfo_mmkin) - plot_biphasic_saem_s <- function() plot(f_uba_dfop_sfo_saem) - vdiffr::expect_doppelganger("mixed model fit for saem object with saemix transformations", plot_biphasic_saem_s) + plot_dfop_sfo_saem_s <- function() plot(f_uba_dfop_sfo_saem) + vdiffr::expect_doppelganger("mixed model fit for saem object with saemix transformations", plot_dfop_sfo_saem_s) skip_on_travis() - plot_biphasic_nlme <- function() plot(dfop_nlme_1) - vdiffr::expect_doppelganger("mixed model fit for nlme object", plot_biphasic_nlme) + plot_dfop_sfo_nlme <- function() plot(dfop_nlme_1) + vdiffr::expect_doppelganger("mixed model fit for nlme object", plot_dfop_sfo_nlme) - #plot_biphasic_mmkin <- function() plot(mixed(mmkin_biphasic)) + #plot_dfop_sfo_mmkin <- function() plot(mixed(mmkin_dfop_sfo)) # Biphasic fits with lots of data and fits have lots of potential for differences - plot_biphasic_nlme <- function() plot(nlme_biphasic) - #plot_biphasic_saem_s <- function() plot(saem_biphasic_s) - plot_biphasic_saem_m <- function() plot(saem_biphasic_m) + plot_dfop_sfo_nlme <- function() plot(nlme_dfop_sfo) + #plot_dfop_sfo_saem_s <- function() plot(saem_dfop_sfo_s) + plot_dfop_sfo_saem_m <- function() plot(saem_dfop_sfo_m) - vdiffr::expect_doppelganger("mixed model fit for saem object with mkin transformations", plot_biphasic_saem_m) + vdiffr::expect_doppelganger("mixed model fit for saem object with mkin transformations", plot_dfop_sfo_saem_m) # different results when working with eigenvalues plot_errmod_fit_D_obs_eigen <- function() plot_err(fit_D_obs_eigen, sep_obs = FALSE) |