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| author | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-29 16:05:11 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2020-05-29 16:05:11 +0200 |
| commit | e6f9e9ca89e35e610d9895b979f1351a47451db0 (patch) | |
| tree | dd9d389c05e35db7a86abd578751199cd2c6a1be /tests/testthat/test_plot.R | |
| parent | 510436646b1bdd5b8cfab70be29334bd3cc9c828 (diff) | |
Improve handling of warnings, reorganize tests
Diffstat (limited to 'tests/testthat/test_plot.R')
| -rw-r--r-- | tests/testthat/test_plot.R | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/tests/testthat/test_plot.R b/tests/testthat/test_plot.R new file mode 100644 index 00000000..a33de07f --- /dev/null +++ b/tests/testthat/test_plot.R @@ -0,0 +1,42 @@ +context("Plotting") + +test_that("Plotting mkinfit and mmkin objects is reproducible", { + skip_on_cran() + plot_default_FOCUS_C_SFO <- function() plot(fits[["SFO", "FOCUS_C"]]) + plot_res_FOCUS_C_SFO <- function() plot(fits[["SFO", "FOCUS_C"]], show_residuals = TRUE) + plot_res_FOCUS_C_SFO_2 <- function() plot_res(fits[["SFO", "FOCUS_C"]]) + plot_sep_FOCUS_C_SFO <- function() plot_sep(fits[["SFO", "FOCUS_C"]]) + mkinparplot_FOCUS_C_SFO <- function() mkinparplot(fits[["SFO", "FOCUS_C"]]) + mkinerrplot_FOCUS_C_SFO <- function() mkinerrplot(fits[["SFO", "FOCUS_C"]]) + mmkin_FOCUS_C <- function() plot(fits[, "FOCUS_C"]) + mmkin_SFO <- function() plot(fits["SFO",]) + fit_D_obs_eigen <- suppressWarnings(mkinfit(SFO_SFO, FOCUS_2006_D, error_model = "obs", quiet = TRUE)) + fit_C_tc <- mkinfit("SFO", FOCUS_2006_C, error_model = "tc", quiet = TRUE) + + plot_errmod_fit_D_obs_eigen <- function() plot_err(fit_D_obs_eigen, sep_obs = FALSE) + plot_errmod_fit_C_tc <- function() plot_err(fit_C_tc) + + plot_res_sfo_sfo <- function() plot_res(f_sfo_sfo_desolve) + plot_err_sfo_sfo <- function() plot_err(f_sfo_sfo_desolve) + plot_errmod_fit_obs_1 <- function() plot_err(fit_obs_1, sep_obs = FALSE) + plot_errmod_fit_tc_1 <- function() plot_err(fit_tc_1, sep_obs = FALSE) + + skip_if(getRversion() > 4.0) + vdiffr::expect_doppelganger("mkinfit plot for FOCUS C with defaults", plot_default_FOCUS_C_SFO) + vdiffr::expect_doppelganger("mkinfit plot for FOCUS C with residuals like in gmkin", plot_res_FOCUS_C_SFO) + vdiffr::expect_doppelganger("plot_res for FOCUS C", plot_res_FOCUS_C_SFO_2) + vdiffr::expect_doppelganger("mkinfit plot for FOCUS C with sep = TRUE", plot_sep_FOCUS_C_SFO) + vdiffr::expect_doppelganger("mkinparplot for FOCUS C SFO", mkinparplot_FOCUS_C_SFO) + vdiffr::expect_doppelganger("mkinerrplot for FOCUS C SFO", mkinerrplot_FOCUS_C_SFO) + vdiffr::expect_doppelganger("mmkin plot for FOCUS C", mmkin_FOCUS_C) + vdiffr::expect_doppelganger("mmkin plot for SFO (FOCUS C and D)", mmkin_SFO) + vdiffr::expect_doppelganger("plot_errmod with FOCUS C tc", plot_errmod_fit_C_tc) + skip_on_travis() # Still not working on Travis, maybe because of deSolve producing + # different results when not working with a compiled model or eigenvalues + vdiffr::expect_doppelganger("plot_errmod with FOCUS D obs eigen", plot_errmod_fit_D_obs_eigen) + vdiffr::expect_doppelganger("plot_res for FOCUS D", plot_res_sfo_sfo) + vdiffr::expect_doppelganger("plot_err for FOCUS D", plot_err_sfo_sfo) + vdiffr::expect_doppelganger("plot_errmod with SFO_lin_a_tc", plot_errmod_fit_tc_1) + vdiffr::expect_doppelganger("plot_errmod with SFO_lin_a_obs", plot_errmod_fit_obs_1) +}) + |