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authorJohannes Ranke <jranke@uni-bremen.de>2019-10-21 22:45:30 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2019-10-21 22:45:30 +0200
commit5b711837e28d838f20c67c057d8de36f3927ff65 (patch)
tree3902b1f6db07323e221a5ee74842c3db999fb8c7 /tests/testthat
parent86e6d8368109d1a9c631af45227659178ce934ee (diff)
Adress errors and notes on winbuilder
Diffstat (limited to 'tests/testthat')
-rw-r--r--tests/testthat/summary_DFOP_FOCUS_D_deSolve.txt13
-rw-r--r--tests/testthat/test_plots_summary_twa.R3
2 files changed, 3 insertions, 13 deletions
diff --git a/tests/testthat/summary_DFOP_FOCUS_D_deSolve.txt b/tests/testthat/summary_DFOP_FOCUS_D_deSolve.txt
index 8abc15e7..66ab9348 100644
--- a/tests/testthat/summary_DFOP_FOCUS_D_deSolve.txt
+++ b/tests/testthat/summary_DFOP_FOCUS_D_deSolve.txt
@@ -42,18 +42,7 @@ log_k_m1_sink -5.248 0.13320 -5.518 -4.977
sigma 3.126 0.35850 2.396 3.855
Parameter correlation:
- parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink
-parent_0 1e+00 6e-01 -6e-02 -2e-01
-log_k_parent_sink 6e-01 1e+00 -9e-02 -6e-01
-log_k_parent_m1 -6e-02 -9e-02 1e+00 5e-01
-log_k_m1_sink -2e-01 -6e-01 5e-01 1e+00
-sigma 1e-09 -9e-10 2e-08 -1e-10
- sigma
-parent_0 1e-09
-log_k_parent_sink -9e-10
-log_k_parent_m1 2e-08
-log_k_m1_sink -1e-10
-sigma 1e+00
+NULL
Backtransformed parameters:
Confidence intervals for internally transformed parameters are asymmetric.
diff --git a/tests/testthat/test_plots_summary_twa.R b/tests/testthat/test_plots_summary_twa.R
index 9c802b00..089290f6 100644
--- a/tests/testthat/test_plots_summary_twa.R
+++ b/tests/testthat/test_plots_summary_twa.R
@@ -52,6 +52,7 @@ test_that("Summaries are reproducible", {
test_summary$date.fit <- "Dummy date for testing"
test_summary$date.summary <- "Dummy date for testing"
test_summary$calls <- "test 0"
+ test_summary$Corr <- signif(test_summary$Corr, 1)
test_summary$time <- c(elapsed = "test time 0")
# The correlation matrix is quite platform dependent
# It differs between i386 and amd64 on Windows
@@ -83,7 +84,7 @@ test_that("Summaries are reproducible", {
# The correlation matrix is quite platform dependent
# It differs between i386 and amd64 on Windows
# and between Travis and my own Linux system
- test_summary_3$Corr <- signif(test_summary_3$Corr, 1)
+ test_summary_3$Corr <- NULL
expect_known_output(print(test_summary_3), "summary_DFOP_FOCUS_D_deSolve.txt")
})

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