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authorJohannes Ranke <jranke@uni-bremen.de>2019-05-02 13:17:05 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2019-05-02 13:17:05 +0200
commit70591022c07f0e8fb4dd67789b7c8d78af8ebc18 (patch)
treeacaecfce5ae304cfc48b111c6db24a3f2ed5c83d /tests
parent380a29e81f88cd80c9c6915200ddc7054c8a085a (diff)
Better initials for error model parameters
- Also make it possible to specify initial values for error model parameters. - Run tests - Rebuild docs
Diffstat (limited to 'tests')
-rw-r--r--tests/testthat/DFOP_FOCUS_C_messages.txt2
-rw-r--r--tests/testthat/FOCUS_2006_D.csf2
-rw-r--r--tests/testthat/summary_DFOP_FOCUS_C.txt10
3 files changed, 7 insertions, 7 deletions
diff --git a/tests/testthat/DFOP_FOCUS_C_messages.txt b/tests/testthat/DFOP_FOCUS_C_messages.txt
index 9abde683..4718cea6 100644
--- a/tests/testthat/DFOP_FOCUS_C_messages.txt
+++ b/tests/testthat/DFOP_FOCUS_C_messages.txt
@@ -81,7 +81,7 @@ Sum of squared residuals at call 55: 4.364078
85.01633 -0.7763163 -4.027611 1.248897
Sum of squared residuals at call 56: 4.364078
85.01633 -0.7763164 -4.027611 1.248897
-Sum of squared residuals at call 57: 4.364077
+Sum of squared residuals at call 57: 4.364078
85.01633 -0.7763163 -4.027611 1.248897
85.01633 -0.7763163 -4.027611 1.248897
85.00894 -0.7777917 -4.026307 1.24772
diff --git a/tests/testthat/FOCUS_2006_D.csf b/tests/testthat/FOCUS_2006_D.csf
index 9e912a28..07488d5e 100644
--- a/tests/testthat/FOCUS_2006_D.csf
+++ b/tests/testthat/FOCUS_2006_D.csf
@@ -5,7 +5,7 @@ Description:
MeasurementUnits: % AR
TimeUnits: days
Comments: Created using mkin::CAKE_export
-Date: 2019-04-24
+Date: 2019-05-02
Optimiser: IRLS
[Data]
diff --git a/tests/testthat/summary_DFOP_FOCUS_C.txt b/tests/testthat/summary_DFOP_FOCUS_C.txt
index b0a6bb6d..c4800f35 100644
--- a/tests/testthat/summary_DFOP_FOCUS_C.txt
+++ b/tests/testthat/summary_DFOP_FOCUS_C.txt
@@ -44,11 +44,11 @@ sigma 0.6962 0.16410 0.2406 1.1520
Parameter correlation:
parent_0 log_k1 log_k2 g_ilr sigma
-parent_0 1.000e+00 4.393e-01 8.805e-02 -3.176e-02 5.405e-07
-log_k1 4.393e-01 1.000e+00 4.821e-01 -6.716e-01 4.395e-07
-log_k2 8.805e-02 4.821e-01 1.000e+00 -7.532e-01 -1.151e-07
-g_ilr -3.176e-02 -6.716e-01 -7.532e-01 1.000e+00 -2.142e-08
-sigma 5.405e-07 4.395e-07 -1.151e-07 -2.142e-08 1.000e+00
+parent_0 1.000e+00 4.393e-01 8.805e-02 -3.176e-02 5.407e-07
+log_k1 4.393e-01 1.000e+00 4.821e-01 -6.716e-01 4.399e-07
+log_k2 8.805e-02 4.821e-01 1.000e+00 -7.532e-01 -1.143e-07
+g_ilr -3.176e-02 -6.716e-01 -7.532e-01 1.000e+00 -2.196e-08
+sigma 5.407e-07 4.399e-07 -1.143e-07 -2.196e-08 1.000e+00
Backtransformed parameters:
Confidence intervals for internally transformed parameters are asymmetric.

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