Attempts to reduce vignette size

Reducing the size of some figures and switching of retina figures
in the preamble only gives a small decrease in vignette size,
but may be enough to get the size of the doc directory below 5 MB
to avoid the NOTE in the corresponding check (which I did not get
locally, nor on winbuilder using r-devel.

1 files changed, 3 insertions, 2 deletions

diff --git a/vignettes/compiled_models.Rmd b/vignettes/compiled_models.Rmd
index 03604cc7..7a8ef6f1 100644
--- a/vignettes/compiled_models.Rmd
+++ b/vignettes/compiled_models.Rmd
@@ -4,6 +4,7 @@ author: "Johannes Ranke"
 date: "`r Sys.Date()`"

 output:

   html_document:

+    theme: united

     toc: true

     toc_float: true

     mathjax: null

@@ -43,7 +44,7 @@ compiled version and the R implementation of the differential equations using
 the microbenchmark package.

 

 

-```{r benchmark_SFO_SFO}

+```{r benchmark_SFO_SFO, fig.height = 3}

 library("microbenchmark")

 library("ggplot2")

 mb.1 <- microbenchmark(

@@ -76,7 +77,7 @@ smb.1["median"]/smb.1["deSolve, compiled", "median"]
 

 This evaluation is also taken from the example section of mkinfit. 

 

-```{r benchmark_FOMC_SFO}

+```{r benchmark_FOMC_SFO, fig.height = 3}

 FOMC_SFO <- mkinmod(

   parent = mkinsub("FOMC", "m1"),

   m1 = mkinsub( "SFO"))