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authorJohannes Ranke <jranke@uni-bremen.de>2023-04-20 20:17:12 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2023-04-20 20:17:12 +0200
commit7b7c4bf493ba15824ea43bed764661678b4aca03 (patch)
tree48de1e32327c36ee49fc476dc76ece8397ab55c6 /vignettes/web_only/multistart.rmd
parent842998b688037c007d8876d7e1110c929fe2374c (diff)
parent9ae42bd20bc2543a94cf1581ba9820c2f9e3afbd (diff)
Merge branch 'v1.2.3_pkgdown'
Diffstat (limited to 'vignettes/web_only/multistart.rmd')
-rw-r--r--vignettes/web_only/multistart.rmd9
1 files changed, 4 insertions, 5 deletions
diff --git a/vignettes/web_only/multistart.rmd b/vignettes/web_only/multistart.rmd
index ccf26b3d..34ed1ad4 100644
--- a/vignettes/web_only/multistart.rmd
+++ b/vignettes/web_only/multistart.rmd
@@ -1,7 +1,7 @@
---
title: Short demo of the multistart method
author: Johannes Ranke
-date: Last change 17 April 2023 (rebuilt `r Sys.Date()`)
+date: Last change 20 April 2023 (rebuilt `r Sys.Date()`)
output:
html_document
vignette: >
@@ -38,8 +38,8 @@ function tells us that the confidence interval for the standard deviation
of 'log_k2' includes zero. We check this assessment using multiple runs
with different starting values.
-```{r}
-f_saem_full_multi <- multistart(f_saem_full, n = 16, cores = 8)
+```{r, warnings = FALSE}
+f_saem_full_multi <- multistart(f_saem_full, n = 16, cores = 16)
parplot(f_saem_full_multi, lpos = "topleft")
```
@@ -50,7 +50,7 @@ for k2.
```{r}
f_saem_reduced <- update(f_saem_full, no_random_effect = "log_k2")
illparms(f_saem_reduced)
-f_saem_reduced_multi <- multistart(f_saem_reduced, n = 16, cores = 8)
+f_saem_reduced_multi <- multistart(f_saem_reduced, n = 16, cores = 16)
parplot(f_saem_reduced_multi, lpos = "topright", ylim = c(0.5, 2))
```
@@ -76,4 +76,3 @@ a large improvement in case of the full model, because it is
less well-defined, which impedes convergence. For the reduced
model, using multiple starting values only results in a small
improvement of the model fit.
-

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