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-rw-r--r--GNUmakefile2
-rw-r--r--build.log2
-rw-r--r--check.log23
-rw-r--r--test.log2
4 files changed, 7 insertions, 22 deletions
diff --git a/GNUmakefile b/GNUmakefile
index 193de825..24e903a2 100644
--- a/GNUmakefile
+++ b/GNUmakefile
@@ -70,7 +70,7 @@ clean:
$(RM) Rplots.pdf
test: quickinstall
- "$(RBIN)/Rscript" -e 'library(devtools); devtools::test(".")' 2>&1 | tee test.log
+ "$(RBIN)/Rscript" -e 'devtools::test()' 2>&1 | tee test.log
README.html: README.md
"$(RBIN)/Rscript" -e "rmarkdown::render('README.md', output_format = 'html_document', output_options = list(mathjax = NULL))"
diff --git a/build.log b/build.log
index 4cdccab4..a85d333e 100644
--- a/build.log
+++ b/build.log
@@ -3,7 +3,7 @@
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
-* checking for LF line-endings in source and make files
+* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘mkin_0.9.45.2.tar.gz’
diff --git a/check.log b/check.log
index 66b37a3a..94a146cb 100644
--- a/check.log
+++ b/check.log
@@ -1,5 +1,5 @@
* using log directory ‘/home/jranke/git/mkin/mkin.Rcheck’
-* using R version 3.4.0 (2017-04-21)
+* using R Under development (unstable) (2017-07-21 r72943)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-tests --as-cran’
@@ -7,16 +7,8 @@
* checking extension type ... Package
* this is package ‘mkin’ version ‘0.9.45.2’
* package encoding: UTF-8
-* checking CRAN incoming feasibility ... NOTE
+* checking CRAN incoming feasibility ... Note_to_CRAN_maintainers
Maintainer: ‘Johannes Ranke <jranke@uni-bremen.de>’
-
-Found the following (possibly) invalid URLs:
- URL: http://focus.jrc.ec.europa.eu/dk
- From: inst/doc/mkin.html
- inst/doc/twa.html
- README.md
- Status: 404
- Message: Not Found
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
@@ -26,10 +18,7 @@ Found the following (possibly) invalid URLs:
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mkin’ can be installed ... OK
-* checking installed package size ... NOTE
- installed size is 5.4Mb
- sub-directories of 1Mb or more:
- doc 5.1Mb
+* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
@@ -75,9 +64,5 @@ Found the following (possibly) invalid URLs:
* checking PDF version of manual ... OK
* DONE
-Status: 2 NOTEs
-See
- ‘/home/jranke/git/mkin/mkin.Rcheck/00check.log’
-for details.
-
+Status: OK
diff --git a/test.log b/test.log
index 3593b2a7..195d9e5b 100644
--- a/test.log
+++ b/test.log
@@ -218,7 +218,7 @@ Model cost at call 175 : 50.96274
Optimisation by method Marq successfully terminated.
.
Model predictions with mkinpredict: ...
-Fitting of parent only models: ......................
+Fitting of parent only models: .....................
Complex test case from Schaefer et al. (2007) Piacenza paper: ..
Results for synthetic data established in expertise for UBA (Ranke 2014): ....
Calculation of maximum time weighted average concentrations (TWAs): ...

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