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Diffstat (limited to 'NEWS.md')
| -rw-r--r-- | NEWS.md | 26 |
1 files changed, 17 insertions, 9 deletions
@@ -1,28 +1,36 @@ # mkin 0.9.50.4 (unreleased) -- 'mixed.mmkin' New container for mmkin objects for plotting with the 'plot.mixed.mmkin' method +## General new features - 'mkinmod' models gain arguments 'name' and 'dll_dir' which, in conjunction with a current version of the 'inline' package, make it possible to still use the DLL used for fast ODE solutions with 'deSolve' after saving and restoring the 'mkinmod' object. -- 'f_norm_temp_focus' generic function to normalise time intervals using the FOCUS method, with methods for numeric vectors and 'mkindsg' objects - - 'mkindsg' R6 class for groups of 'mkinds' datasets with metadata -- 'D24_2014' dataset +- 'f_norm_temp_focus' generic function to normalise time intervals using the FOCUS method, with methods for numeric vectors and 'mkindsg' objects + +- 'D24_2014' and 'dimethenamid_2018' datasets - 'focus_soil_moisture' FOCUS default soil moisture data -- 'plot.mixed.mmkin' method used for 'nlme.mmkin' and 'saem.mmkin', both inheriting from 'mixed.mmkin' (currently virtual) - -- 'saem' generic function to fit saemix models, with a generator 'saem.mmkin', summary and plot methods +- 'update' method for 'mmkin' objects - 'transform_odeparms', 'backtransform_odeparms': Use logit transformation for solitary fractions like the g parameter of the DFOP model, or formation fractions for a pathway to only one target variable -- 'update' method for 'mmkin' objects +## Mixed-effects models + +- 'mixed.mmkin' New container for mmkin objects for plotting with the 'plot.mixed.mmkin' method + +- 'plot.mixed.mmkin' method used for 'nlme.mmkin' and 'saem.mmkin', both inheriting from 'mixed.mmkin' (currently virtual) - 'plot', 'summary' and 'print' methods for 'nlme.mmkin' objects -- 'saemix_model', 'saemix_data': Helper functions to fit nonlinear mixed-effects models for mmkin row objects using the saemix package +- Add the current development version of the saemix package as a second, optional backend for mixed-effects models + +- DESCRIPTION: Additional_repositories entry pointing to my drat repository on github for a suitable saemix version + +- 'saemix_model', 'saemix_data': Helper functions to fit nonlinear mixed-effects models for mmkin row objects. + +- 'saem' generic function to fit saemix models using 'saemix_model' and 'saemix_data', with a generator 'saem.mmkin', summary and plot methods # mkin 0.9.50.3 (2020-10-08) |