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+++ b/docs/articles/FOCUS_D.html
@@ -16,13 +16,16 @@
</div>
<div id="navbar" class="navbar-collapse collapse">
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- <a href="../index.html">Home</a>
+ <a href="../reference/index.html">Reference</a>
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+ <a href="../articles/index.html">Articles</a>
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- <a href="https://github.com/jranke/mkin">
+ <a href="http://github.com/jranke/mkin">
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@@ -38,7 +41,7 @@
<h1>Example evaluation of FOCUS Example Dataset D</h1>
<h4 class="author">Johannes Ranke</h4>
- <h4 class="date">2016-10-26</h4>
+ <h4 class="date">2016-11-03</h4>
</div>
@@ -105,16 +108,16 @@
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r">fit &lt;-<span class="st"> </span><span class="kw"><a href="../reference/mkinfit.html">mkinfit</a></span>(SFO_SFO, FOCUS_2006_D, <span class="dt">quiet =</span> <span class="ot">TRUE</span>)</code></pre></div>
<p>A plot of the fit including a residual plot for both observed variables is obtained using the <code>plot</code> method for <code>mkinfit</code> objects.</p>
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">plot</span>(fit, <span class="dt">show_residuals =</span> <span class="ot">TRUE</span>)</code></pre></div>
-<p><img src="FOCUS_D_files/figure-html/unnamed-chunk-5-1.png" width="672"></p>
+<p><img src="FOCUS_D_files/figure-html/plot-1.png" width="672"></p>
<p>Confidence intervals for the parameter estimates are obtained using the <code>mkinparplot</code> function.</p>
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw"><a href="../reference/mkinparplot.html">mkinparplot</a></span>(fit)</code></pre></div>
-<p><img src="FOCUS_D_files/figure-html/unnamed-chunk-6-1.png" width="672"></p>
+<p><img src="FOCUS_D_files/figure-html/plot_2-1.png" width="672"></p>
<p>A comprehensive report of the results is obtained using the <code>summary</code> method for <code>mkinfit</code> objects.</p>
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw">summary</span>(fit)</code></pre></div>
<pre><code>## mkin version: 0.9.44.9000
-## R version: 3.3.1
-## Date of fit: Wed Oct 26 23:18:10 2016
-## Date of summary: Wed Oct 26 23:18:10 2016
+## R version: 3.3.2
+## Date of fit: Wed Nov 2 16:25:22 2016
+## Date of summary: Wed Nov 2 16:25:22 2016
##
## Equations:
## d_parent = - k_parent_sink * parent - k_parent_m1 * parent
@@ -122,7 +125,7 @@
##
## Model predictions using solution type deSolve
##
-## Fitted with method Port using 153 model solutions performed in 0.628 s
+## Fitted with method Port using 153 model solutions performed in 0.665 s
##
## Weighting: none
##
@@ -243,7 +246,7 @@
<footer><div class="copyright">
- <p>Developed by Johannes Ranke, Eurofins Regulatory AG.</p>
+ <p>Developed by Johannes Ranke.</p>
</div>
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