diff options
Diffstat (limited to 'docs/articles/compiled_models.R')
| -rw-r--r-- | docs/articles/compiled_models.R | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/docs/articles/compiled_models.R b/docs/articles/compiled_models.R index 5ce343cb..dd450e0d 100644 --- a/docs/articles/compiled_models.R +++ b/docs/articles/compiled_models.R @@ -15,12 +15,12 @@ SFO_SFO <- mkinmod( library("microbenchmark") library("ggplot2") mb.1 <- microbenchmark( - "deSolve, not compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, - solution_type = "deSolve", + "deSolve, not compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, + solution_type = "deSolve", use_compiled = FALSE, quiet = TRUE), - "Eigenvalue based" = mkinfit(SFO_SFO, FOCUS_2006_D, + "Eigenvalue based" = mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "eigen", quiet = TRUE), - "deSolve, compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, + "deSolve, compiled" = mkinfit(SFO_SFO, FOCUS_2006_D, solution_type = "deSolve", quiet = TRUE), times = 3, control = list(warmup = 0)) @@ -38,7 +38,7 @@ FOMC_SFO <- mkinmod( m1 = mkinsub( "SFO")) mb.2 <- microbenchmark( - "deSolve, not compiled" = mkinfit(FOMC_SFO, FOCUS_2006_D, + "deSolve, not compiled" = mkinfit(FOMC_SFO, FOCUS_2006_D, use_compiled = FALSE, quiet = TRUE), "deSolve, compiled" = mkinfit(FOMC_SFO, FOCUS_2006_D, quiet = TRUE), times = 3, control = list(warmup = 0)) |