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Diffstat (limited to 'docs/articles')
-rw-r--r-- | docs/articles/FOCUS_D.html | 2 | ||||
-rw-r--r-- | docs/articles/FOCUS_L.html | 38 | ||||
-rw-r--r-- | docs/articles/mkin.html | 2 | ||||
-rw-r--r-- | docs/articles/twa.html | 2 | ||||
-rw-r--r-- | docs/articles/web_only/FOCUS_Z.html | 2 | ||||
-rw-r--r-- | docs/articles/web_only/compiled_models.html | 12 |
6 files changed, 29 insertions, 29 deletions
diff --git a/docs/articles/FOCUS_D.html b/docs/articles/FOCUS_D.html index b03e7612..0d463f63 100644 --- a/docs/articles/FOCUS_D.html +++ b/docs/articles/FOCUS_D.html @@ -84,7 +84,7 @@ <h1>Example evaluation of FOCUS Example Dataset D</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>FOCUS_D.Rmd</code></div> diff --git a/docs/articles/FOCUS_L.html b/docs/articles/FOCUS_L.html index e83664bc..dc562002 100644 --- a/docs/articles/FOCUS_L.html +++ b/docs/articles/FOCUS_L.html @@ -84,7 +84,7 @@ <h1>Example evaluation of FOCUS Laboratory Data L1 to L3</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>FOCUS_L.Rmd</code></div> @@ -110,8 +110,8 @@ <a class="sourceLine" id="cb2-2" data-line-number="2"><span class="kw">summary</span>(m.L1.SFO)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:25 2018 -## Date of summary: Fri Nov 23 20:47:25 2018 +## Date of fit: Mon Nov 26 09:07:07 2018 +## Date of summary: Mon Nov 26 09:07:07 2018 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent @@ -201,15 +201,15 @@ <div class="sourceCode" id="cb7"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb7-1" data-line-number="1"><span class="kw">summary</span>(m.L1.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:26 2018 -## Date of summary: Fri Nov 23 20:47:26 2018 +## Date of fit: Mon Nov 26 09:07:09 2018 +## Date of summary: Mon Nov 26 09:07:09 2018 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 611 model solutions performed in 1.467 s +## Fitted with method Port using 611 model solutions performed in 1.481 s ## ## Weighting: none ## @@ -296,15 +296,15 @@ <div class="sourceCode" id="cb12"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb12-1" data-line-number="1"><span class="kw">summary</span>(m.L2.FOMC, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:27 2018 -## Date of summary: Fri Nov 23 20:47:27 2018 +## Date of fit: Mon Nov 26 09:07:10 2018 +## Date of summary: Mon Nov 26 09:07:10 2018 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 81 model solutions performed in 0.192 s +## Fitted with method Port using 81 model solutions performed in 0.191 s ## ## Weighting: none ## @@ -367,8 +367,8 @@ <div class="sourceCode" id="cb15"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb15-1" data-line-number="1"><span class="kw">summary</span>(m.L2.DFOP, <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:28 2018 -## Date of summary: Fri Nov 23 20:47:28 2018 +## Date of fit: Mon Nov 26 09:07:11 2018 +## Date of summary: Mon Nov 26 09:07:11 2018 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -377,7 +377,7 @@ ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 336 model solutions performed in 0.822 s +## Fitted with method Port using 336 model solutions performed in 0.86 s ## ## Weighting: none ## @@ -459,8 +459,8 @@ <div class="sourceCode" id="cb21"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb21-1" data-line-number="1"><span class="kw">summary</span>(mm.L3[[<span class="st">"DFOP"</span>, <span class="dv">1</span>]])</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:29 2018 -## Date of summary: Fri Nov 23 20:47:29 2018 +## Date of fit: Mon Nov 26 09:07:12 2018 +## Date of summary: Mon Nov 26 09:07:12 2018 ## ## Equations: ## d_parent/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * @@ -469,7 +469,7 @@ ## ## Model predictions using solution type analytical ## -## Fitted with method Port using 137 model solutions performed in 0.336 s +## Fitted with method Port using 137 model solutions performed in 0.339 s ## ## Weighting: none ## @@ -560,8 +560,8 @@ <div class="sourceCode" id="cb26"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb26-1" data-line-number="1"><span class="kw">summary</span>(mm.L4[[<span class="st">"SFO"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:29 2018 -## Date of summary: Fri Nov 23 20:47:30 2018 +## Date of fit: Mon Nov 26 09:07:12 2018 +## Date of summary: Mon Nov 26 09:07:13 2018 ## ## Equations: ## d_parent/dt = - k_parent_sink * parent @@ -620,8 +620,8 @@ <div class="sourceCode" id="cb28"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb28-1" data-line-number="1"><span class="kw">summary</span>(mm.L4[[<span class="st">"FOMC"</span>, <span class="dv">1</span>]], <span class="dt">data =</span> <span class="ot">FALSE</span>)</a></code></pre></div> <pre><code>## mkin version used for fitting: 0.9.47.6 ## R version used for fitting: 3.5.1 -## Date of fit: Fri Nov 23 20:47:30 2018 -## Date of summary: Fri Nov 23 20:47:30 2018 +## Date of fit: Mon Nov 26 09:07:13 2018 +## Date of summary: Mon Nov 26 09:07:13 2018 ## ## Equations: ## d_parent/dt = - (alpha/beta) * 1/((time/beta) + 1) * parent diff --git a/docs/articles/mkin.html b/docs/articles/mkin.html index 4ead1062..e73b989a 100644 --- a/docs/articles/mkin.html +++ b/docs/articles/mkin.html @@ -84,7 +84,7 @@ <h1>Introduction to mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>mkin.Rmd</code></div> diff --git a/docs/articles/twa.html b/docs/articles/twa.html index 8c053c10..6ba7e1a7 100644 --- a/docs/articles/twa.html +++ b/docs/articles/twa.html @@ -84,7 +84,7 @@ <h1>Calculation of time weighted average concentrations with mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>twa.Rmd</code></div> diff --git a/docs/articles/web_only/FOCUS_Z.html b/docs/articles/web_only/FOCUS_Z.html index 5215e039..6ebe3c73 100644 --- a/docs/articles/web_only/FOCUS_Z.html +++ b/docs/articles/web_only/FOCUS_Z.html @@ -84,7 +84,7 @@ <h1>Example evaluation of FOCUS dataset Z</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>FOCUS_Z.Rmd</code></div> diff --git a/docs/articles/web_only/compiled_models.html b/docs/articles/web_only/compiled_models.html index c47425fb..25a3a62e 100644 --- a/docs/articles/web_only/compiled_models.html +++ b/docs/articles/web_only/compiled_models.html @@ -84,7 +84,7 @@ <h1>Performance benefit by using compiled model definitions in mkin</h1> <h4 class="author">Johannes Ranke</h4> - <h4 class="date">2018-11-23</h4> + <h4 class="date">2018-11-26</h4> <div class="hidden name"><code>compiled_models.Rmd</code></div> @@ -125,9 +125,9 @@ <a class="sourceLine" id="cb5-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Lade nötiges Paket: rbenchmark</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 3 deSolve, compiled 3 2.274 1.000 2.273 0 -## 1 deSolve, not compiled 3 17.686 7.777 17.676 0 -## 2 Eigenvalue based 3 2.800 1.231 2.799 0 +## 3 deSolve, compiled 3 2.296 1.000 2.295 0 +## 1 deSolve, not compiled 3 17.937 7.812 17.928 0 +## 2 Eigenvalue based 3 2.861 1.246 2.859 0 ## user.child sys.child ## 3 0 0 ## 1 0 0 @@ -156,8 +156,8 @@ <a class="sourceLine" id="cb8-16" data-line-number="16">}</a></code></pre></div> <pre><code>## Successfully compiled differential equation model from auto-generated C code.</code></pre> <pre><code>## test replications elapsed relative user.self sys.self -## 2 deSolve, compiled 3 4.038 1.000 4.035 0 -## 1 deSolve, not compiled 3 37.805 9.362 37.788 0 +## 2 deSolve, compiled 3 4.020 1.000 4.017 0 +## 1 deSolve, not compiled 3 37.721 9.383 37.704 0 ## user.child sys.child ## 2 0 0 ## 1 0 0</code></pre> |