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Diffstat (limited to 'docs/dev/articles/web_only/dimethenamid_2018.html')
| -rw-r--r-- | docs/dev/articles/web_only/dimethenamid_2018.html | 50 |
1 files changed, 28 insertions, 22 deletions
diff --git a/docs/dev/articles/web_only/dimethenamid_2018.html b/docs/dev/articles/web_only/dimethenamid_2018.html index 60f1ab5a..ec7f54d8 100644 --- a/docs/dev/articles/web_only/dimethenamid_2018.html +++ b/docs/dev/articles/web_only/dimethenamid_2018.html @@ -34,7 +34,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../../index.html">mkin</a> - <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.1.2</span> + <span class="version label label-info" data-toggle="tooltip" data-placement="bottom" title="In-development version">1.2.2</span> </span> </div> @@ -63,19 +63,25 @@ <a href="../../articles/web_only/dimethenamid_2018.html">Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models</a> </li> <li> - <a href="../../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a> + <a href="../../articles/web_only/multistart.html">Short demo of the multistart method</a> </li> <li> <a href="../../articles/web_only/compiled_models.html">Performance benefit by using compiled model definitions in mkin</a> </li> <li> + <a href="../../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a> + </li> + <li> <a href="../../articles/twa.html">Calculation of time weighted average concentrations with mkin</a> </li> <li> <a href="../../articles/web_only/NAFTA_examples.html">Example evaluation of NAFTA SOP Attachment examples</a> </li> <li> - <a href="../../articles/web_only/benchmarks.html">Some benchmark timings</a> + <a href="../../articles/web_only/benchmarks.html">Benchmark timings for mkin</a> + </li> + <li> + <a href="../../articles/web_only/saem_benchmarks.html">Benchmark timings for saem.mmkin</a> </li> </ul> </li> @@ -106,7 +112,7 @@ <h1 data-toc-skip>Example evaluations of the dimethenamid data from 2018</h1> <h4 data-toc-skip class="author">Johannes Ranke</h4> - <h4 data-toc-skip class="date">Last change 1 July 2022, built on 16 Sep 2022</h4> + <h4 data-toc-skip class="date">Last change 1 July 2022, built on 24 Nov 2022</h4> <small class="dont-index">Source: <a href="https://github.com/jranke/mkin/blob/HEAD/vignettes/web_only/dimethenamid_2018.rmd" class="external-link"><code>vignettes/web_only/dimethenamid_2018.rmd</code></a></small> <div class="hidden name"><code>dimethenamid_2018.rmd</code></div> @@ -366,7 +372,7 @@ DFOP tc more iterations 665.88 663.80</code></pre> <span><span class="op">)</span></span> <span><span class="fu"><a href="https://rdrr.io/r/base/print.html" class="external-link">print</a></span><span class="op">(</span><span class="va">AIC_parent_saemix_methods_defaults</span><span class="op">)</span></span></code></pre></div> <pre><code> is gq lin -668.27 718.36 666.49 </code></pre> +669.77 669.36 670.95 </code></pre> </div> </div> <div class="section level3"> @@ -437,7 +443,7 @@ DFOP tc more iterations 665.88 663.80</code></pre> </h2> <div class="sourceCode" id="cb32"><pre class="downlit sourceCode r"> <code class="sourceCode R"><span><span class="fu"><a href="https://rdrr.io/r/utils/sessionInfo.html" class="external-link">sessionInfo</a></span><span class="op">(</span><span class="op">)</span></span></code></pre></div> -<pre><code>R version 4.2.1 (2022-06-23) +<pre><code>R version 4.2.2 (2022-10-31) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Debian GNU/Linux 11 (bullseye) @@ -457,24 +463,24 @@ attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: -[1] nlme_3.1-158 mkin_1.1.2 knitr_1.39 +[1] saemix_3.2 npde_3.2 nlme_3.1-160 mkin_1.2.2 knitr_1.41 loaded via a namespace (and not attached): - [1] deSolve_1.33 zoo_1.8-10 tidyselect_1.1.2 xfun_0.31 - [5] bslib_0.4.0 purrr_0.3.4 lattice_0.20-45 colorspace_2.0-3 - [9] vctrs_0.4.1 generics_0.1.3 htmltools_0.5.3 yaml_2.3.5 -[13] utf8_1.2.2 rlang_1.0.4 pkgdown_2.0.6 saemix_3.1 -[17] jquerylib_0.1.4 pillar_1.8.0 glue_1.6.2 DBI_1.1.3 -[21] lifecycle_1.0.1 stringr_1.4.0 munsell_0.5.0 gtable_0.3.0 -[25] ragg_1.2.2 memoise_2.0.1 evaluate_0.15 npde_3.2 -[29] fastmap_1.1.0 lmtest_0.9-40 parallel_4.2.1 fansi_1.0.3 -[33] highr_0.9 KernSmooth_2.23-20 scales_1.2.0 cachem_1.0.6 -[37] desc_1.4.1 jsonlite_1.8.0 systemfonts_1.0.4 fs_1.5.2 -[41] textshaping_0.3.6 gridExtra_2.3 ggplot2_3.3.6 digest_0.6.29 -[45] stringi_1.7.8 dplyr_1.0.9 grid_4.2.1 rprojroot_2.0.3 -[49] cli_3.3.0 tools_4.2.1 magrittr_2.0.3 sass_0.4.2 -[53] tibble_3.1.8 pkgconfig_2.0.3 assertthat_0.2.1 rmarkdown_2.14.3 -[57] mclust_5.4.10 R6_2.5.1 compiler_4.2.1 </code></pre> + [1] deSolve_1.34 zoo_1.8-11 tidyselect_1.2.0 xfun_0.35 + [5] bslib_0.4.1 purrr_0.3.5 lattice_0.20-45 colorspace_2.0-3 + [9] vctrs_0.5.1 generics_0.1.3 htmltools_0.5.3 yaml_2.3.6 +[13] utf8_1.2.2 rlang_1.0.6 pkgdown_2.0.6 jquerylib_0.1.4 +[17] pillar_1.8.1 glue_1.6.2 DBI_1.1.3 lifecycle_1.0.3 +[21] stringr_1.4.1 munsell_0.5.0 gtable_0.3.1 ragg_1.2.4 +[25] codetools_0.2-18 memoise_2.0.1 evaluate_0.18 fastmap_1.1.0 +[29] lmtest_0.9-40 parallel_4.2.2 fansi_1.0.3 highr_0.9 +[33] scales_1.2.1 cachem_1.0.6 desc_1.4.2 jsonlite_1.8.3 +[37] systemfonts_1.0.4 fs_1.5.2 textshaping_0.3.6 gridExtra_2.3 +[41] ggplot2_3.4.0 digest_0.6.30 stringi_1.7.8 dplyr_1.0.10 +[45] grid_4.2.2 rprojroot_2.0.3 cli_3.4.1 tools_4.2.2 +[49] magrittr_2.0.3 sass_0.4.3 tibble_3.1.8 pkgconfig_2.0.3 +[53] assertthat_0.2.1 rmarkdown_2.18 R6_2.5.1 mclust_6.0.0 +[57] compiler_4.2.2 </code></pre> </div> <div class="section level2"> <h2 id="references">References<a class="anchor" aria-label="anchor" href="#references"></a> |