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Kinetic evaluations shown for these datasets are intended +to illustrate and advance kinetic modelling. The fact that these data and +some results are shown here does not imply a license to use them in the +context of pesticide registrations, as the use of the data may be +constrained by data protection regulations.</p> + </div> + + <pre class="usage"><span class='va'>D24_2014</span></pre> + + + <h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2> + + <p>An <a href='mkindsg.html'>mkindsg</a> object grouping five datasets</p> + <h2 class="hasAnchor" id="source"><a class="anchor" href="#source"></a>Source</h2> + + <p>Hellenic Ministry of Rural Development and Agriculture (2014) +Final addendum to the Renewal Assessment Report - public version - 2,4-D +Volume 3 Annex B.8 Fate and behaviour in the environment +<a href='http://registerofquestions.efsa.europa.eu/roqFrontend/outputLoader?output=ON-3812'>http://registerofquestions.efsa.europa.eu/roqFrontend/outputLoader?output=ON-3812</a></p> + <h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2> + + <p>Data for the first dataset are from p. 685. Data for the other four +datasets were used in the preprocessed versions given in the kinetics +section (p. 761ff.), with the exception of residues smaller than 1 for DCP +in the soil from Site I2, where the values given on p. 694 were used.</p> +<p>The R code used to create this data object is installed with this package +in the 'dataset_generation' directory. In the code, page numbers are given for +specific pieces of information in the comments.</p> + + <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> + <pre class="examples"><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>D24_2014</span><span class='op'>)</span> +</div><div class='output co'>#> <mkindsg> holding 5 mkinds objects +#> Title $title: Aerobic soil degradation data on 2,4-D from the EU assessment in 2014 +#> Occurrence of observed compounds $observed_n: +#> D24 DCP DCA +#> 5 4 4 +#> Time normalisation factors $f_time_norm: +#> [1] 1.6062378 0.7118732 0.7156063 0.7156063 0.8977124 +#> Meta information $meta: +#> study usda_soil_type study_moisture_ref_type +#> Mississippi Cohen 1991 Silt loam <NA> +#> Fayette Liu and Adelfinskaya 2011 Silt loam pF1 +#> RefSol 03-G Liu and Adelfinskaya 2011 Loam pF1 +#> Site E1 Liu and Adelfinskaya 2011 Loam pF1 +#> Site I2 Liu and Adelfinskaya 2011 Loamy sand pF1 +#> rel_moisture temperature +#> Mississippi NA 25 +#> Fayette 0.5 20 +#> RefSol 03-G 0.5 20 +#> Site E1 0.5 20 +#> Site I2 0.5 20</div><div class='input'><span class='co'># \dontrun{</span> +<span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>D24_2014</span><span class='op'>$</span><span class='va'>ds</span><span class='op'>[[</span><span class='fl'>1</span><span class='op'>]</span><span class='op'>]</span>, data <span class='op'>=</span> <span class='cn'>TRUE</span><span class='op'>)</span> +</div><div class='output co'>#> <mkinds> with $title: Mississippi +#> Observed compounds $observed: D24 +#> Sampling times $sampling_times: +#> 0, 2, 4, 7, 15, 24, 35, 56, 71, 114, 183, 273, 365 +#> With a maximum of 1 replicates +#> time D24 +#> 1 0 96.8 +#> 2 2 81.0 +#> 3 4 81.7 +#> 4 7 88.2 +#> 5 15 66.3 +#> 6 24 72.9 +#> 7 35 62.6 +#> 8 56 54.6 +#> 9 71 35.2 +#> 10 114 18.0 +#> 11 183 11.3 +#> 12 273 9.9 +#> 13 365 6.3</div><div class='input'><span class='va'>m_D24</span> <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span><span class='op'>(</span>D24 <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, to <span class='op'>=</span> <span class='st'>"DCP"</span><span class='op'>)</span>, + DCP <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, to <span class='op'>=</span> <span class='st'>"DCA"</span><span class='op'>)</span>, + DCA <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span><span class='op'>)</span><span class='op'>)</span> +</div><div class='output co'>#> <span class='message'>Temporary DLL for differentials generated and loaded</span></div><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>m_D24</span><span class='op'>)</span> +</div><div class='output co'>#> <mkinmod> model generated with +#> Use of formation fractions $use_of_ff: max +#> Specification $spec: +#> $D24 +#> $type: SFO; $to: DCP; $sink: TRUE +#> $DCP +#> $type: SFO; $to: DCA; $sink: TRUE +#> $DCA +#> $type: SFO; $sink: TRUE +#> Coefficient matrix $coefmat available +#> Compiled model $cf available +#> Differential equations: +#> d_D24/dt = - k_D24 * D24 +#> d_DCP/dt = + f_D24_to_DCP * k_D24 * D24 - k_DCP * DCP +#> d_DCA/dt = + f_DCP_to_DCA * k_DCP * DCP - k_DCA * DCA</div><div class='input'><span class='va'>m_D24_2</span> <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinmod</a></span><span class='op'>(</span>D24 <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"DFOP"</span>, to <span class='op'>=</span> <span class='st'>"DCP"</span><span class='op'>)</span>, + DCP <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span>, to <span class='op'>=</span> <span class='st'>"DCA"</span><span class='op'>)</span>, + DCA <span class='op'>=</span> <span class='fu'><a href='mkinmod.html'>mkinsub</a></span><span class='op'>(</span><span class='st'>"SFO"</span><span class='op'>)</span><span class='op'>)</span> +</div><div class='output co'>#> <span class='message'>Temporary DLL for differentials generated and loaded</span></div><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/print.html'>print</a></span><span class='op'>(</span><span class='va'>m_D24_2</span><span class='op'>)</span> +</div><div class='output co'>#> <mkinmod> model generated with +#> Use of formation fractions $use_of_ff: max +#> Specification $spec: +#> $D24 +#> $type: DFOP; $to: DCP; $sink: TRUE +#> $DCP +#> $type: SFO; $to: DCA; $sink: TRUE +#> $DCA +#> $type: SFO; $sink: TRUE +#> Compiled model $cf available +#> Differential equations: +#> d_D24/dt = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * +#> time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time))) +#> * D24 +#> d_DCP/dt = + f_D24_to_DCP * ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * +#> exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 +#> * time))) * D24 - k_DCP * DCP +#> d_DCA/dt = + f_DCP_to_DCA * k_DCP * DCP - k_DCA * DCA</div><div class='input'><span class='co'># }</span> +</div></pre> + </div> + <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar"> + <nav id="toc" data-toggle="toc" class="sticky-top"> + <h2 data-toc-skip>Contents</h2> + </nav> + </div> +</div> + + + <footer> + <div class="copyright"> + <p>Developed by Johannes Ranke.</p> +</div> + +<div class="pkgdown"> + <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.6.1.</p> +</div> + + </footer> + </div> + + + + + </body> +</html> + + |