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-rw-r--r--docs/reference/index.html44
1 files changed, 33 insertions, 11 deletions
diff --git a/docs/reference/index.html b/docs/reference/index.html
index 63e3de8f..956648d2 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -17,7 +17,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1.1</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1.2</span>
</span>
</div>
@@ -98,9 +98,27 @@
<td><p>Fit one or more kinetic models with one or more state variables to one or
more datasets</p></td>
</tr><tr><td>
- <p><code><a href="nafta.html">nafta()</a></code> <code><a href="nafta.html">print(<i>&lt;nafta&gt;</i>)</a></code> </p>
+ <p><code><a href="mhmkin.html">mhmkin()</a></code> <code><a href="mhmkin.html">`[`(<i>&lt;mhmkin&gt;</i>)</a></code> <code><a href="mhmkin.html">print(<i>&lt;mhmkin&gt;</i>)</a></code> </p>
</td>
- <td><p>Evaluate parent kinetics using the NAFTA guidance</p></td>
+ <td><p>Fit nonlinear mixed-effects models built from one or more kinetic
+degradation models and one or more error models</p></td>
+ </tr></tbody><tbody><tr><th colspan="2">
+ <h2 id="generics">Generics <a href="#generics" class="anchor" aria-hidden="true"></a></h2>
+ <p class="section-desc"></p><p>Generic functions introduced by the package</p>
+ </th>
+ </tr></tbody><tbody><tr><td>
+ <p><code><a href="convergence.html">convergence()</a></code> <code><a href="convergence.html">print(<i>&lt;convergence.mmkin&gt;</i>)</a></code> </p>
+ </td>
+ <td><p>Method to get convergence information</p></td>
+ </tr><tr><td>
+ <p><code><a href="illparms.html">illparms()</a></code> <code><a href="illparms.html">print(<i>&lt;illparms.mmkin&gt;</i>)</a></code> <code><a href="illparms.html">print(<i>&lt;illparms.mhmkin&gt;</i>)</a></code> </p>
+ </td>
+ <td><p>Method to get the names of ill-defined parameters</p></td>
+ </tr><tr><td>
+ <p><code><a href="endpoints.html">endpoints()</a></code> </p>
+ </td>
+ <td><p>Function to calculate endpoints for further use from kinetic models fitted
+with mkinfit</p></td>
</tr></tbody><tbody><tr><th colspan="2">
<h2 id="show-results">Show results <a href="#show-results" class="anchor" aria-hidden="true"></a></h2>
<p class="section-desc"></p><p>Functions working with mkinfit objects</p>
@@ -138,11 +156,6 @@ more datasets</p></td>
</td>
<td><p>Calculate the minimum error to assume in order to pass the variance test</p></td>
</tr><tr><td>
- <p><code><a href="endpoints.html">endpoints()</a></code> </p>
- </td>
- <td><p>Function to calculate endpoints for further use from kinetic models fitted
-with mkinfit</p></td>
- </tr><tr><td>
<p><code><a href="aw.html">aw()</a></code> </p>
</td>
<td><p>Calculate Akaike weights for model averaging</p></td>
@@ -167,9 +180,13 @@ of an mmkin object</p></td>
<p><code><a href="AIC.mmkin.html">AIC(<i>&lt;mmkin&gt;</i>)</a></code> <code><a href="AIC.mmkin.html">BIC(<i>&lt;mmkin&gt;</i>)</a></code> </p>
</td>
<td><p>Calculate the AIC for a column of an mmkin object</p></td>
+ </tr><tr><td>
+ <p><code><a href="summary.mmkin.html">summary(<i>&lt;mmkin&gt;</i>)</a></code> <code><a href="summary.mmkin.html">print(<i>&lt;summary.mmkin&gt;</i>)</a></code> </p>
+ </td>
+ <td><p>Summary method for class "mmkin"</p></td>
</tr></tbody><tbody><tr><th colspan="2">
<h2 id="mixed-models">Mixed models <a href="#mixed-models" class="anchor" aria-hidden="true"></a></h2>
- <p class="section-desc"></p><p>Create and work with nonlinear mixed effects models</p>
+ <p class="section-desc"></p><p>Create and work with nonlinear hierarchical models</p>
</th>
</tr></tbody><tbody><tr><td>
<p><code><a href="nlme.mmkin.html">nlme(<i>&lt;mmkin&gt;</i>)</a></code> <code><a href="nlme.mmkin.html">print(<i>&lt;nlme.mmkin&gt;</i>)</a></code> <code><a href="nlme.mmkin.html">update(<i>&lt;nlme.mmkin&gt;</i>)</a></code> </p>
@@ -180,6 +197,11 @@ of an mmkin object</p></td>
</td>
<td><p>Fit nonlinear mixed models with SAEM</p></td>
</tr><tr><td>
+ <p><code><a href="mhmkin.html">mhmkin()</a></code> <code><a href="mhmkin.html">`[`(<i>&lt;mhmkin&gt;</i>)</a></code> <code><a href="mhmkin.html">print(<i>&lt;mhmkin&gt;</i>)</a></code> </p>
+ </td>
+ <td><p>Fit nonlinear mixed-effects models built from one or more kinetic
+degradation models and one or more error models</p></td>
+ </tr><tr><td>
<p><code><a href="plot.mixed.mmkin.html">plot(<i>&lt;mixed.mmkin&gt;</i>)</a></code> </p>
</td>
<td><p>Plot predictions from a fitted nonlinear mixed model obtained via an mmkin row object</p></td>
@@ -204,7 +226,7 @@ of an mmkin object</p></td>
</td>
<td><p>Create a mixed effects model from an mmkin row object</p></td>
</tr><tr><td>
- <p><code><a href="reexports.html">reexports</a></code> </p>
+ <p><code><a href="reexports.html">reexports</a></code> <code><a href="reexports.html">intervals</a></code> <code><a href="reexports.html">lrtest</a></code> <code><a href="reexports.html">nlme</a></code> </p>
</td>
<td><p>Objects exported from other packages</p></td>
</tr><tr><td>
@@ -429,7 +451,7 @@ kinetic models fitted with mkinfit</p></td>
</div>
<div class="pkgdown">
- <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.5.</p>
+ <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p>
</div>
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