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-rw-r--r--docs/reference/index.html101
1 files changed, 75 insertions, 26 deletions
diff --git a/docs/reference/index.html b/docs/reference/index.html
index e6a373d6..f77881fe 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -10,23 +10,27 @@
<!-- jquery -->
-<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.3.1/jquery.min.js" integrity="sha256-FgpCb/KJQlLNfOu91ta32o/NMZxltwRo8QtmkMRdAu8=" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.4.1/jquery.min.js" integrity="sha256-CSXorXvZcTkaix6Yvo6HppcZGetbYMGWSFlBw8HfCJo=" crossorigin="anonymous"></script>
<!-- Bootstrap -->
-<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.3.7/css/bootstrap.min.css" integrity="sha256-916EbMg70RQy9LHiGkXzG8hSg9EdNy97GazNG/aiY1w=" crossorigin="anonymous" />
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/css/bootstrap.min.css" integrity="sha256-bZLfwXAP04zRMK2BjiO8iu9pf4FbLqX6zitd+tIvLhE=" crossorigin="anonymous" />
-<script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha256-U5ZEeKfGNOja007MMD3YBI0A3OSZOQbeG6z2f2Y0hu8=" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.4.1/js/bootstrap.min.js" integrity="sha256-nuL8/2cJ5NDSSwnKD8VqreErSWHtnEP9E7AySL+1ev4=" crossorigin="anonymous"></script>
+
+<!-- bootstrap-toc -->
+<link rel="stylesheet" href="../bootstrap-toc.css">
+<script src="../bootstrap-toc.js"></script>
<!-- Font Awesome icons -->
-<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.7.1/css/all.min.css" integrity="sha256-nAmazAk6vS34Xqo0BSrTb+abbtFlgsFK7NKSi6o7Y78=" crossorigin="anonymous" />
-<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.7.1/css/v4-shims.min.css" integrity="sha256-6qHlizsOWFskGlwVOKuns+D1nB6ssZrHQrNj1wGplHc=" crossorigin="anonymous" />
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/all.min.css" integrity="sha256-mmgLkCYLUQbXn0B1SRqzHar6dCnv9oZFPEC1g1cwlkk=" crossorigin="anonymous" />
+<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.12.1/css/v4-shims.min.css" integrity="sha256-wZjR52fzng1pJHwx4aV2AO3yyTOXrcDW7jBpJtTwVxw=" crossorigin="anonymous" />
<!-- clipboard.js -->
-<script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js" integrity="sha256-FiZwavyI2V6+EXO1U+xzLG3IKldpiTFf3153ea9zikQ=" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.6/clipboard.min.js" integrity="sha256-inc5kl9MA1hkeYUt+EC3BhlIgyp/2jDIyBLS6k3UxPI=" crossorigin="anonymous"></script>
<!-- headroom.js -->
-<script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.9.4/headroom.min.js" integrity="sha256-DJFC1kqIhelURkuza0AvYal5RxMtpzLjFhsnVIeuk+U=" crossorigin="anonymous"></script>
-<script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.9.4/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/headroom.min.js" integrity="sha256-AsUX4SJE1+yuDu5+mAVzJbuYNPHj/WroHuZ8Ir/CkE0=" crossorigin="anonymous"></script>
+<script src="https://cdnjs.cloudflare.com/ajax/libs/headroom/0.11.0/jQuery.headroom.min.js" integrity="sha256-ZX/yNShbjqsohH1k95liqY9Gd8uOiE1S4vZc+9KQ1K4=" crossorigin="anonymous"></script>
<!-- pkgdown -->
<link href="../pkgdown.css" rel="stylesheet">
@@ -53,7 +57,7 @@
</head>
- <body>
+ <body data-spy="scroll" data-target="#toc">
<div class="container template-reference-index">
<header>
<div class="navbar navbar-default navbar-fixed-top" role="navigation">
@@ -111,7 +115,12 @@
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
-
+ <li>
+ <a href="http://github.com/jranke/mkin/">
+ <span class="fab fa fab fa-github fa-lg"></span>
+
+ </a>
+</li>
</ul>
</div><!--/.nav-collapse -->
@@ -143,6 +152,11 @@
<p class="section-desc"><p>Essential functionality</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -176,6 +190,11 @@ more datasets</p></td>
<p class="section-desc"><p>Functions working with mkinfit objects</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -251,6 +270,11 @@ with mkinfit</p></td>
<p class="section-desc"><p>Functions working with aggregated results</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -278,6 +302,11 @@ of an mmkin object</p></td>
<p class="section-desc"><p>Create and work with nonlinear mixed models</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -310,6 +339,11 @@ of an mmkin object</p></td>
<p class="section-desc"></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -402,6 +436,11 @@ of an mmkin object</p></td>
<p class="section-desc"></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -422,6 +461,11 @@ of an mmkin object</p></td>
<p class="section-desc"></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -521,6 +565,11 @@ kinetic models fitted with mkinfit</p></td>
<p class="section-desc"><p>Parent only model solutions</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -560,7 +609,7 @@ kinetic models fitted with mkinfit</p></td>
</tr><tr>
<td>
- <p><code><a href="logistic.solution.html">logistic.solution()</a></code> </p>
+ <p><code><a href="logistic.solution.html">logistic.solution()</a></code> <code><a href="logistic.solution.html">logistic.solution()</a></code> </p>
</td>
<td><p>Logistic kinetics</p></td>
</tr>
@@ -571,6 +620,11 @@ kinetic models fitted with mkinfit</p></td>
<p class="section-desc"></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -585,6 +639,11 @@ kinetic models fitted with mkinfit</p></td>
<p class="section-desc"><p>Functions that have been superseded</p></p>
</th>
</tr>
+
+
+ </tbody><tbody>
+
+
<tr>
<td>
@@ -596,20 +655,10 @@ kinetic models fitted with mkinfit</p></td>
</table>
</div>
- <div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
- <h2>Contents</h2>
- <ul class="nav nav-pills nav-stacked">
- <li><a href="#section-main-functions">Main functions</a></li>
- <li><a href="#section-show-results">Show results</a></li>
- <li><a href="#section-work-with-mmkin-objects">Work with mmkin objects</a></li>
- <li><a href="#section-mixed-models">Mixed models</a></li>
- <li><a href="#section-datasets-and-known-results">Datasets and known results</a></li>
- <li><a href="#section-nafta-guidance">NAFTA guidance</a></li>
- <li><a href="#section-helper-functions-mainly-used-internally">Helper functions mainly used internally</a></li>
- <li><a href="#section-analytical-solutions">Analytical solutions</a></li>
- <li><a href="#section-generate-synthetic-datasets">Generate synthetic datasets</a></li>
- <li><a href="#section-deprecated-functions">Deprecated functions</a></li>
- </ul>
+ <div class="col-md-3 hidden-xs hidden-sm" id="pkgdown-sidebar">
+ <nav id="toc" data-toggle="toc" class="sticky-top">
+ <h2 data-toc-skip>Contents</h2>
+ </nav>
</div>
</div>
@@ -620,7 +669,7 @@ kinetic models fitted with mkinfit</p></td>
</div>
<div class="pkgdown">
- <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.4.1.</p>
+ <p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.5.1.</p>
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