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Diffstat (limited to 'docs/reference/index.html')
| -rw-r--r-- | docs/reference/index.html | 34 |
1 files changed, 27 insertions, 7 deletions
diff --git a/docs/reference/index.html b/docs/reference/index.html index 23eb608b..b7d59a21 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -60,12 +60,7 @@ </ul> <ul class="nav navbar-nav navbar-right"> - <li> - <a href="http://github.com/jranke/mkin"> - <span class="fa fa-github fa-lg"></span> - - </a> -</li> + </ul> </div><!--/.nav-collapse --> </div><!--/.container --> @@ -115,7 +110,7 @@ </ul> <p><a href="mkinparplot.html">Function to plot the confidence intervals obtained using - mkinfit</a></p> + list(list("mkinfit"))</a></p> <ul> <li><code><a href="mkinparplot.html">mkinparplot</a></code></li> </ul> @@ -124,6 +119,16 @@ <ul> <li><code><a href="mkinresplot.html">mkinresplot</a></code></li> </ul> + + <p><a href="plot.mkinfit.html">Plot the observed data and the fitted model of an mkinfit object</a></p> + <ul> + <li><code><a href="plot.mkinfit.html">plot.mkinfit</a></code></li><li><code><a href="plot.mkinfit.html">plot_sep</a></code></li> + </ul> + + <p><a href="summary.mkinfit.html">Summary method for class "mkinfit"</a></p> + <ul> + <li><code><a href="summary.mkinfit.html">summary.mkinfit</a></code></li><li><code><a href="summary.mkinfit.html">print.summary.mkinfit</a></code></li> + </ul> <h2 id="section-work-with-mmkin-objects" class="hasAnchor"><a href="#section-work-with-mmkin-objects" class="anchor"></a>Work with mmkin objects</h2> <p class="section-desc"><p>Functions working with aggregated results</p></p> @@ -176,6 +181,11 @@ <li><code><a href="print.mkinds.html">print.mkinds</a></code></li> </ul> + <p><a href="schaefer07_complex_case.html">Metabolism data set used for checking the software quality of KinGUI</a></p> + <ul> + <li><code><a href="schaefer07_complex_case.html">schaefer07_complex_case</a></code></li><li><code><a href="schaefer07_complex_case.html">schaefer07_complex_results</a></code></li> + </ul> + <p><a href="synthetic_data_for_UBA.html">Synthetic datasets for one parent compound with two metabolites</a></p> <ul> <li><code><a href="synthetic_data_for_UBA.html">synthetic_data_for_UBA_2014</a></code></li> @@ -189,6 +199,11 @@ <li><code><a href="geometric_mean.html">geometric_mean</a></code></li> </ul> + <p><a href="ilr.html">Function to perform isometric log-ratio transformation</a></p> + <ul> + <li><code><a href="ilr.html">ilr</a></code></li><li><code><a href="ilr.html">invilr</a></code></li> + </ul> + <p><a href="mkin_long_to_wide.html">Convert a dataframe from long to wide format</a></p> <ul> <li><code><a href="mkin_long_to_wide.html">mkin_long_to_wide</a></code></li> @@ -213,6 +228,11 @@ <ul> <li><code><a href="print.mkinmod.html">print.mkinmod</a></code></li> </ul> + + <p><a href="transform_odeparms.html">Functions to transform and backtransform kinetic parameters for fitting</a></p> + <ul> + <li><code><a href="transform_odeparms.html">transform_odeparms</a></code></li><li><code><a href="transform_odeparms.html">backtransform_odeparms</a></code></li> + </ul> <h2 id="section-analytical-solutions" class="hasAnchor"><a href="#section-analytical-solutions" class="anchor"></a>Analytical solutions</h2> <p class="section-desc"><p>Parent only model solutions</p></p> |