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-rw-r--r--docs/reference/index.html66
1 files changed, 42 insertions, 24 deletions
diff --git a/docs/reference/index.html b/docs/reference/index.html
index fa424060..8987db96 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -185,45 +185,39 @@ more datasets</p></td>
</tr><tr>
<td>
- <p><code><a href="parms.html">parms()</a></code> </p>
- </td>
- <td><p>Extract model parameters from mkinfit models</p></td>
- </tr><tr>
-
- <td>
- <p><code><a href="confint.mkinfit.html">confint(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
+ <p><code><a href="summary.mkinfit.html">summary(<i>&lt;mkinfit&gt;</i>)</a></code> <code><a href="summary.mkinfit.html">print(<i>&lt;summary.mkinfit&gt;</i>)</a></code> </p>
</td>
- <td><p>Confidence intervals for parameters of mkinfit objects</p></td>
+ <td><p>Summary method for class "mkinfit"</p></td>
</tr><tr>
<td>
- <p><code><a href="summary.mkinfit.html">summary(<i>&lt;mkinfit&gt;</i>)</a></code> <code><a href="summary.mkinfit.html">print(<i>&lt;summary.mkinfit&gt;</i>)</a></code> </p>
+ <p><code><a href="parms.html">parms()</a></code> </p>
</td>
- <td><p>Summary method for class "mkinfit"</p></td>
+ <td><p>Extract model parameters from mkinfit models</p></td>
</tr><tr>
<td>
- <p><code><a href="logLik.mkinfit.html">logLik(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
+ <p><code><a href="confint.mkinfit.html">confint(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
</td>
- <td><p>Calculated the log-likelihood of a fitted mkinfit object</p></td>
+ <td><p>Confidence intervals for parameters of mkinfit objects</p></td>
</tr><tr>
<td>
- <p><code><a href="mkinresplot.html">mkinresplot()</a></code> </p>
+ <p><code><a href="update.mkinfit.html">update(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
</td>
- <td><p>Function to plot residuals stored in an mkin object</p></td>
+ <td><p>Update an mkinfit model with different arguments</p></td>
</tr><tr>
<td>
- <p><code><a href="mkinparplot.html">mkinparplot()</a></code> </p>
+ <p><code><a href="lrtest.mkinfit.html">lrtest(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
</td>
- <td><p>Function to plot the confidence intervals obtained using mkinfit</p></td>
+ <td><p>Likelihood ratio test for mkinfit models</p></td>
</tr><tr>
<td>
- <p><code><a href="mkinerrplot.html">mkinerrplot()</a></code> </p>
+ <p><code><a href="mkinerrmin.html">mkinerrmin()</a></code> </p>
</td>
- <td><p>Function to plot squared residuals and the error model for an mkin object</p></td>
+ <td><p>Calculate the minimum error to assume in order to pass the variance test</p></td>
</tr><tr>
<td>
@@ -234,9 +228,9 @@ with mkinfit</p></td>
</tr><tr>
<td>
- <p><code><a href="mkinerrmin.html">mkinerrmin()</a></code> </p>
+ <p><code><a href="CAKE_export.html">CAKE_export()</a></code> </p>
</td>
- <td><p>Calculate the minimum error to assume in order to pass the variance test</p></td>
+ <td><p>Export a list of datasets format to a CAKE study file</p></td>
</tr>
</tbody><tbody>
<tr>
@@ -380,7 +374,7 @@ of an mmkin object</p></td>
</tbody><tbody>
<tr>
<th colspan="2">
- <h2 id="section-helper-functions" class="hasAnchor"><a href="#section-helper-functions" class="anchor"></a>Helper functions</h2>
+ <h2 id="section-helper-functions-mainly-used-internally" class="hasAnchor"><a href="#section-helper-functions-mainly-used-internally" class="anchor"></a>Helper functions mainly used internally</h2>
<p class="section-desc"></p>
</th>
</tr>
@@ -442,9 +436,33 @@ kinetic models fitted with mkinfit</p></td>
</tr><tr>
<td>
- <p><code><a href="CAKE_export.html">CAKE_export()</a></code> </p>
+ <p><code><a href="logLik.mkinfit.html">logLik(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
</td>
- <td><p>Export a list of datasets format to a CAKE study file</p></td>
+ <td><p>Calculated the log-likelihood of a fitted mkinfit object</p></td>
+ </tr><tr>
+
+ <td>
+ <p><code><a href="residuals.mkinfit.html">residuals(<i>&lt;mkinfit&gt;</i>)</a></code> </p>
+ </td>
+ <td><p>Extract residuals from an mkinfit model</p></td>
+ </tr><tr>
+
+ <td>
+ <p><code><a href="mkinresplot.html">mkinresplot()</a></code> </p>
+ </td>
+ <td><p>Function to plot residuals stored in an mkin object</p></td>
+ </tr><tr>
+
+ <td>
+ <p><code><a href="mkinparplot.html">mkinparplot()</a></code> </p>
+ </td>
+ <td><p>Function to plot the confidence intervals obtained using mkinfit</p></td>
+ </tr><tr>
+
+ <td>
+ <p><code><a href="mkinerrplot.html">mkinerrplot()</a></code> </p>
+ </td>
+ <td><p>Function to plot squared residuals and the error model for an mkin object</p></td>
</tr>
</tbody><tbody>
<tr>
@@ -536,7 +554,7 @@ kinetic models fitted with mkinfit</p></td>
<li><a href="#section-work-with-mmkin-objects">Work with mmkin objects</a></li>
<li><a href="#section-datasets-and-known-results">Datasets and known results</a></li>
<li><a href="#section-nafta-guidance">NAFTA guidance</a></li>
- <li><a href="#section-helper-functions">Helper functions</a></li>
+ <li><a href="#section-helper-functions-mainly-used-internally">Helper functions mainly used internally</a></li>
<li><a href="#section-analytical-solutions">Analytical solutions</a></li>
<li><a href="#section-generate-synthetic-datasets">Generate synthetic datasets</a></li>
<li><a href="#section-deprecated-functions">Deprecated functions</a></li>

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