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Diffstat (limited to 'docs/reference/mean_degparms.html')
| -rw-r--r-- | docs/reference/mean_degparms.html | 41 | 
1 files changed, 29 insertions, 12 deletions
| diff --git a/docs/reference/mean_degparms.html b/docs/reference/mean_degparms.html index bea9f2d8..dedb8660 100644 --- a/docs/reference/mean_degparms.html +++ b/docs/reference/mean_degparms.html @@ -17,7 +17,7 @@        </button>        <span class="navbar-brand">          <a class="navbar-link" href="../index.html">mkin</a> -        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1.0</span> +        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.2.0</span>        </span>      </div> @@ -44,19 +44,25 @@        <a href="../articles/web_only/dimethenamid_2018.html">Example evaluations of dimethenamid data from 2018 with nonlinear mixed-effects models</a>      </li>      <li> -      <a href="../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a> +      <a href="../articles/web_only/multistart.html">Short demo of the multistart method</a>      </li>      <li>        <a href="../articles/web_only/compiled_models.html">Performance benefit by using compiled model definitions in mkin</a>      </li>      <li> +      <a href="../articles/web_only/FOCUS_Z.html">Example evaluation of FOCUS Example Dataset Z</a> +    </li> +    <li>        <a href="../articles/twa.html">Calculation of time weighted average concentrations with mkin</a>      </li>      <li>        <a href="../articles/web_only/NAFTA_examples.html">Example evaluation of NAFTA SOP Attachment examples</a>      </li>      <li> -      <a href="../articles/web_only/benchmarks.html">Some benchmark timings</a> +      <a href="../articles/web_only/benchmarks.html">Benchmark timings for mkin</a> +    </li> +    <li> +      <a href="../articles/web_only/saem_benchmarks.html">Benchmark timings for saem.mmkin</a>      </li>    </ul></li>  <li> @@ -87,36 +93,47 @@      </div>      <div id="ref-usage"> -    <div class="sourceCode"><pre class="sourceCode r"><code><span class="fu">mean_degparms</span><span class="op">(</span> -  <span class="va">object</span>, -  random <span class="op">=</span> <span class="cn">FALSE</span>, -  test_log_parms <span class="op">=</span> <span class="cn">FALSE</span>, -  conf.level <span class="op">=</span> <span class="fl">0.6</span>, -  default_log_parms <span class="op">=</span> <span class="cn">NA</span> -<span class="op">)</span></code></pre></div> +    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">mean_degparms</span><span class="op">(</span></span> +<span>  <span class="va">object</span>,</span> +<span>  random <span class="op">=</span> <span class="cn">FALSE</span>,</span> +<span>  test_log_parms <span class="op">=</span> <span class="cn">FALSE</span>,</span> +<span>  conf.level <span class="op">=</span> <span class="fl">0.6</span>,</span> +<span>  default_log_parms <span class="op">=</span> <span class="cn">NA</span></span> +<span><span class="op">)</span></span></code></pre></div>      </div>      <div id="arguments">      <h2>Arguments</h2>      <dl><dt>object</dt>  <dd><p>An mmkin row object containing several fits of the same model to different datasets</p></dd> + +  <dt>random</dt>  <dd><p>Should a list with fixed and random effects be returned?</p></dd> + +  <dt>test_log_parms</dt>  <dd><p>If TRUE, log parameters are only considered in  the mean calculations if their untransformed counterparts (most likely  rate constants) pass the t-test for significant difference from zero.</p></dd> + +  <dt>conf.level</dt>  <dd><p>Possibility to adjust the required confidence level  for parameter that are tested if requested by 'test_log_parms'.</p></dd> + +  <dt>default_log_parms</dt>  <dd><p>If set to a numeric value, this is used  as a default value for the tested log parameters that failed the  t-test.</p></dd> +  </dl></div>      <div id="value">      <h2>Value</h2> -    <p>If random is FALSE (default), a named vector containing mean values +     + +<p>If random is FALSE (default), a named vector containing mean values  of the fitted degradation model parameters. If random is TRUE, a list with  fixed and random effects, in the format required by the start argument of  nlme for the case of a single grouping variable ds.</p> @@ -134,7 +151,7 @@ nlme for the case of a single grouping variable ds.</p>  </div>  <div class="pkgdown"> -  <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.3.</p> +  <p></p><p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.0.6.</p>  </div>        </footer></div> | 
