aboutsummaryrefslogtreecommitdiff
path: root/docs/reference/mkinmod.html
diff options
context:
space:
mode:
Diffstat (limited to 'docs/reference/mkinmod.html')
-rw-r--r--docs/reference/mkinmod.html16
1 files changed, 8 insertions, 8 deletions
diff --git a/docs/reference/mkinmod.html b/docs/reference/mkinmod.html
index d1204e2e..2f2e89d9 100644
--- a/docs/reference/mkinmod.html
+++ b/docs/reference/mkinmod.html
@@ -75,7 +75,7 @@ list of lists can be given in the speclist argument." />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mkin</a>
- <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.49.11</span>
+ <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.9.50</span>
</span>
</div>
@@ -152,7 +152,7 @@ list of lists can be given in the speclist argument.</p>
<pre class="usage"><span class='fu'>mkinmod</span>(
<span class='no'>...</span>,
- <span class='kw'>use_of_ff</span> <span class='kw'>=</span> <span class='st'>"min"</span>,
+ <span class='kw'>use_of_ff</span> <span class='kw'>=</span> <span class='st'>"max"</span>,
<span class='kw'>speclist</span> <span class='kw'>=</span> <span class='kw'>NULL</span>,
<span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>,
<span class='kw'>verbose</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>
@@ -252,15 +252,15 @@ in the FOCUS and NAFTA guidance documents are used.</p>
<span class='no'>SFO_SFO</span> <span class='kw'>&lt;-</span> <span class='fu'>mkinmod</span>(
<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>, <span class='st'>"m1"</span>),
<span class='kw'>m1</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>), <span class='kw'>verbose</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>)</div><div class='output co'>#&gt; Compilation argument:
-#&gt; /usr/lib/R/bin/R CMD SHLIB file66a9718e919b.c 2&gt; file66a9718e919b.c.err.txt
+#&gt; /usr/lib/R/bin/R CMD SHLIB fileb6a4eaab60.c 2&gt; fileb6a4eaab60.c.err.txt
#&gt; Program source:
#&gt; 1: #include &lt;R.h&gt;
#&gt; 2:
#&gt; 3:
#&gt; 4: static double parms [3];
-#&gt; 5: #define k_parent_sink parms[0]
-#&gt; 6: #define k_parent_m1 parms[1]
-#&gt; 7: #define k_m1_sink parms[2]
+#&gt; 5: #define k_parent parms[0]
+#&gt; 6: #define f_parent_to_m1 parms[1]
+#&gt; 7: #define k_m1 parms[2]
#&gt; 8:
#&gt; 9: void initpar(void (* odeparms)(int *, double *)) {
#&gt; 10: int N = 3;
@@ -270,8 +270,8 @@ in the FOCUS and NAFTA guidance documents are used.</p>
#&gt; 14:
#&gt; 15: void func ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
#&gt; 16:
-#&gt; 17: f[0] = - k_parent_sink * y[0] - k_parent_m1 * y[0];
-#&gt; 18: f[1] = + k_parent_m1 * y[0] - k_m1_sink * y[1];
+#&gt; 17: f[0] = - k_parent * y[0];
+#&gt; 18: f[1] = + f_parent_to_m1 * k_parent * y[0] - k_m1 * y[1];
#&gt; 19: }</div><div class='output co'>#&gt; <span class='message'>Successfully compiled differential equation model from auto-generated C code.</span></div><div class='input'>
<span class='co'># If we have several parallel metabolites</span>
<span class='co'># (compare tests/testthat/test_synthetic_data_for_UBA_2014.R)</span>

Contact - Imprint