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-rw-r--r--docs/reference/mkinpredict.html18
1 files changed, 10 insertions, 8 deletions
diff --git a/docs/reference/mkinpredict.html b/docs/reference/mkinpredict.html
index 7b75b85d..074ac3ac 100644
--- a/docs/reference/mkinpredict.html
+++ b/docs/reference/mkinpredict.html
@@ -333,14 +333,14 @@
<span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/c'>c</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fl'>100</span>, <span class='kw'>m1</span> <span class='kw'>=</span> <span class='fl'>0</span>), <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/seq'>seq</a></span>(<span class='fl'>0</span>, <span class='fl'>20</span>, <span class='kw'>by</span> <span class='kw'>=</span> <span class='fl'>0.1</span>),
<span class='kw'>solution_type</span> <span class='kw'>=</span> <span class='st'>"deSolve"</span>)[<span class='fl'>201</span>,]))</div><div class='output co'>#&gt; time parent m1
#&gt; 201 20 4.978707 27.46227</div><div class='output co'>#&gt; User System verstrichen
-#&gt; 0.002 0.000 0.002 </div><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/system.time'>system.time</a></span>(
+#&gt; 0.002 0.000 0.001 </div><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/system.time'>system.time</a></span>(
<span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/print'>print</a></span>(<span class='fu'>mkinpredict</span>(<span class='no'>SFO_SFO</span>, <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/c'>c</a></span>(<span class='kw'>k_parent_m1</span> <span class='kw'>=</span> <span class='fl'>0.05</span>, <span class='kw'>k_parent_sink</span> <span class='kw'>=</span> <span class='fl'>0.1</span>, <span class='kw'>k_m1_sink</span> <span class='kw'>=</span> <span class='fl'>0.01</span>),
<span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/c'>c</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fl'>100</span>, <span class='kw'>m1</span> <span class='kw'>=</span> <span class='fl'>0</span>), <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/seq'>seq</a></span>(<span class='fl'>0</span>, <span class='fl'>20</span>, <span class='kw'>by</span> <span class='kw'>=</span> <span class='fl'>0.1</span>),
<span class='kw'>solution_type</span> <span class='kw'>=</span> <span class='st'>"deSolve"</span>, <span class='kw'>use_compiled</span> <span class='kw'>=</span> <span class='fl'>FALSE</span>)[<span class='fl'>201</span>,]))</div><div class='output co'>#&gt; time parent m1
#&gt; 201 20 4.978707 27.46227</div><div class='output co'>#&gt; User System verstrichen
-#&gt; 0.021 0.000 0.021 </div><div class='input'>
+#&gt; 0.022 0.000 0.021 </div><div class='input'>
</div><div class='input'> <span class='co'># Predict from a fitted model</span>
- <span class='no'>f</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_C</span>)</div><div class='output co'>#&gt; Sum of squared residuals at call 1: 552.5739
+ <span class='no'>f</span> <span class='kw'>&lt;-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>SFO_SFO</span>, <span class='no'>FOCUS_2006_C</span>)</div><div class='output co'>#&gt; <span class='message'>Ordinary least squares optimisation</span></div><div class='output co'>#&gt; Sum of squared residuals at call 1: 552.5739
#&gt; Sum of squared residuals at call 3: 552.5739
#&gt; Sum of squared residuals at call 4: 552.5739
#&gt; Sum of squared residuals at call 6: 279.9345
@@ -350,6 +350,7 @@
#&gt; Sum of squared residuals at call 12: 200.3629
#&gt; Sum of squared residuals at call 13: 200.3629
#&gt; Sum of squared residuals at call 18: 197.9039
+#&gt; Sum of squared residuals at call 23: 197.9039
#&gt; Sum of squared residuals at call 25: 196.6754
#&gt; Sum of squared residuals at call 27: 196.6754
#&gt; Sum of squared residuals at call 32: 196.5742
@@ -366,15 +367,16 @@
#&gt; Sum of squared residuals at call 58: 196.5334
#&gt; Sum of squared residuals at call 59: 196.5334
#&gt; Sum of squared residuals at call 65: 196.5334
+#&gt; Sum of squared residuals at call 73: 196.5334
#&gt; Negative log-likelihood at call 75: 26.64668
#&gt; Negative log-likelihood at call 103: 26.64668
#&gt; Optimisation successfully terminated.</div><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/utils/topics/head'>head</a></span>(<span class='fu'>mkinpredict</span>(<span class='no'>f</span>))</div><div class='output co'>#&gt; time parent m1
#&gt; 1 0.0 82.49216 0.000000
-#&gt; 2 0.1 80.00563 1.179956
-#&gt; 3 0.2 77.59404 2.312583
-#&gt; 4 0.3 75.25515 3.399424
-#&gt; 5 0.4 72.98675 4.441974
-#&gt; 6 0.5 70.78673 5.441685</div><div class='input'> </div></pre>
+#&gt; 2 0.1 80.00563 1.179955
+#&gt; 3 0.2 77.59404 2.312580
+#&gt; 4 0.3 75.25515 3.399419
+#&gt; 5 0.4 72.98675 4.441969
+#&gt; 6 0.5 70.78673 5.441679</div><div class='input'> </div></pre>
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