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-rw-r--r--docs/reference/summary.mkinfit.html30
1 files changed, 17 insertions, 13 deletions
diff --git a/docs/reference/summary.mkinfit.html b/docs/reference/summary.mkinfit.html
index a4f3d04f..9c4a21a9 100644
--- a/docs/reference/summary.mkinfit.html
+++ b/docs/reference/summary.mkinfit.html
@@ -209,17 +209,17 @@
<h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
- <pre class="examples"><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/summary'>summary</a></span>(<span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>)), <span class='no'>FOCUS_2006_A</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>))</div><div class='output co'>#&gt; <span class='warning'>Warning: Could not calculate correlation; no covariance matrix</span></div><div class='output co'>#&gt; mkin version used for fitting: 0.9.49.4
+ <pre class="examples"><div class='input'> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/summary'>summary</a></span>(<span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='fu'><a href='mkinmod.html'>mkinmod</a></span>(<span class='kw'>parent</span> <span class='kw'>=</span> <span class='fu'><a href='mkinsub.html'>mkinsub</a></span>(<span class='st'>"SFO"</span>)), <span class='no'>FOCUS_2006_A</span>, <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>))</div><div class='output co'>#&gt; mkin version used for fitting: 0.9.49.4
#&gt; R version used for fitting: 3.6.0
-#&gt; Date of fit: Tue May 7 08:09:03 2019
-#&gt; Date of summary: Tue May 7 08:09:03 2019
+#&gt; Date of fit: Tue May 7 08:37:31 2019
+#&gt; Date of summary: Tue May 7 08:37:31 2019
#&gt;
#&gt; Equations:
#&gt; d_parent/dt = - k_parent_sink * parent
#&gt;
#&gt; Model predictions using solution type analytical
#&gt;
-#&gt; Fitted using 39 model solutions performed in 0.08 s
+#&gt; Fitted using 131 model solutions performed in 0.277 s
#&gt;
#&gt; Error model:
#&gt; Constant variance
@@ -240,21 +240,25 @@
#&gt; None
#&gt;
#&gt; Optimised, transformed parameters with symmetric confidence intervals:
-#&gt; Estimate Std. Error Lower Upper
-#&gt; parent_0 109.200 NA NA NA
-#&gt; log_k_parent_sink -3.291 NA NA NA
-#&gt; sigma 5.266 NA NA NA
+#&gt; Estimate Std. Error Lower Upper
+#&gt; parent_0 109.200 3.70400 99.630 118.700
+#&gt; log_k_parent_sink -3.291 0.09176 -3.527 -3.055
+#&gt; sigma 5.266 1.31600 1.882 8.649
#&gt;
#&gt; Parameter correlation:
-#&gt; No covariance matrix
+#&gt; parent_0 log_k_parent_sink sigma
+#&gt; parent_0 1.000e+00 5.428e-01 1.648e-07
+#&gt; log_k_parent_sink 5.428e-01 1.000e+00 2.513e-07
+#&gt; sigma 1.648e-07 2.513e-07 1.000e+00
+#&gt;
#&gt; Backtransformed parameters:
#&gt; Confidence intervals for internally transformed parameters are asymmetric.
#&gt; t-test (unrealistically) based on the assumption of normal distribution
#&gt; for estimators of untransformed parameters.
-#&gt; Estimate t value Pr(&gt;t) Lower Upper
-#&gt; parent_0 109.20000 NA NA NA NA
-#&gt; k_parent_sink 0.03722 NA NA NA NA
-#&gt; sigma 5.26600 NA NA NA NA
+#&gt; Estimate t value Pr(&gt;t) Lower Upper
+#&gt; parent_0 109.20000 29.47 4.218e-07 99.6300 118.70000
+#&gt; k_parent_sink 0.03722 10.90 5.650e-05 0.0294 0.04712
+#&gt; sigma 5.26600 4.00 5.162e-03 1.8820 8.64900
#&gt;
#&gt; FOCUS Chi2 error levels in percent:
#&gt; err.min n.optim df

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