diff options
Diffstat (limited to 'inst/unitTests')
-rw-r--r-- | inst/unitTests/Makefile | 15 | ||||
-rw-r--r-- | inst/unitTests/runit.mkinmod.R | 53 |
2 files changed, 68 insertions, 0 deletions
diff --git a/inst/unitTests/Makefile b/inst/unitTests/Makefile new file mode 100644 index 00000000..8d132253 --- /dev/null +++ b/inst/unitTests/Makefile @@ -0,0 +1,15 @@ +TOP=../.. +PKG=${shell cd ${TOP};pwd} +SUITE=doRUnit.R +R=R + +all: inst test + +inst: # Install package + cd ${TOP}/..;\ + ${R} CMD INSTALL ${PKG} + +test: # Run unit tests + export RCMDCHECK=FALSE;\ + cd ${TOP}/tests;\ + ${R} --vanilla --slave < ${SUITE} diff --git a/inst/unitTests/runit.mkinmod.R b/inst/unitTests/runit.mkinmod.R new file mode 100644 index 00000000..b6ca6b8d --- /dev/null +++ b/inst/unitTests/runit.mkinmod.R @@ -0,0 +1,53 @@ +test.mkinmod.SFO <- function()
+{
+ SFO.diffs <- c(
+ parent = "d_parent = - k_parent_sink * parent"
+ )
+ SFO.parms <- c("k_parent_sink")
+ SFO.map <- list(parent = "parent")
+ SFO <- list(diffs = SFO.diffs, parms = SFO.parms, map = SFO.map)
+ class(SFO) <- "mkinmod"
+ SFO.mkinmod <- mkinmod(spec = list(
+ parent = list(type = "SFO", to = NA, sink=TRUE))
+ )
+ checkIdentical(SFO, SFO.mkinmod)
+}
+
+test.mkinmod.SFORB <- function()
+{
+ SFORB.diffs <- c(
+ parent_free = paste(
+ "d_parent_free = - k_parent_free_sink * parent_free",
+ "- k_parent_free_bound * parent_free",
+ "+ k_parent_bound_free * parent_bound"),
+ parent_bound = paste(
+ "d_parent_bound =",
+ "+ k_parent_free_bound * parent_free",
+ "- k_parent_bound_free * parent_bound")
+ )
+ SFORB.parms <- c("k_parent_free_sink", "k_parent_free_bound", "k_parent_bound_free")
+ SFORB.map <- list(parent = c("parent_free", "parent_bound"))
+ SFORB <- list(diffs = SFORB.diffs, parms = SFORB.parms, map = SFORB.map)
+ class(SFORB) <- "mkinmod"
+ SFORB.mkinmod <- mkinmod(spec = list(
+ parent = list(type = "SFORB", to = NA, sink=TRUE))
+ )
+ checkIdentical(SFORB, SFORB.mkinmod)
+}
+
+test.mkinmod.SFO_SFO <- function()
+{
+ SFO_SFO.diffs <- c(
+ parent = "d_parent = - k_parent_sink * parent - k_parent_m1 * parent",
+ m1 = "d_m1 = - k_m1_sink * m1 + k_parent_m1 * parent"
+ )
+ SFO_SFO.parms <- c("k_parent_sink", "k_m1_sink", "k_parent_m1")
+ SFO_SFO.map <- list(parent = "parent", m1 = "m1")
+ SFO_SFO <- list(diffs = SFO_SFO.diffs, parms = SFO_SFO.parms, map = SFO_SFO.map)
+ class(SFO_SFO) <- "mkinmod"
+ SFO_SFO.mkinmod <- mkinmod(spec = list(
+ parent = list(type = "SFO", to = "m1", sink=TRUE),
+ m1 = list(type = "SFO", to = NA, sink=TRUE))
+ )
+ checkIdentical(SFO_SFO, SFO_SFO.mkinmod)
+}
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