diff options
Diffstat (limited to 'log/test.log')
| -rw-r--r-- | log/test.log | 24 |
1 files changed, 12 insertions, 12 deletions
diff --git a/log/test.log b/log/test.log index 8166668a..b1b4ae31 100644 --- a/log/test.log +++ b/log/test.log @@ -8,22 +8,22 @@ ✔ | 12 | Confidence intervals and p-values [0.4s] ✔ | 1 12 | Dimethenamid data from 2018 [12.5s] ──────────────────────────────────────────────────────────────────────────────── -Skip ('test_dmta.R:88'): Different backends get consistent results for SFO-SFO3+, dimethenamid data +Skip ('test_dmta.R:88:3'): Different backends get consistent results for SFO-SFO3+, dimethenamid data Reason: Fitting this ODE model with saemix takes about 15 minutes on my system ──────────────────────────────────────────────────────────────────────────────── -✔ | 14 | Error model fitting [2.4s] +✔ | 14 | Error model fitting [2.3s] ✔ | 5 | Time step normalisation ✔ | 4 | Calculation of FOCUS chi2 error levels [0.3s] ✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.4s] ✔ | 4 | Test fitting the decline of metabolites from their maximum [0.2s] ✔ | 1 | Fitting the logistic model [0.1s] -✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [19.1s] -✔ | 2 16 | Nonlinear mixed-effects models [148.6s] +✔ | 10 | Batch fitting and diagnosing hierarchical kinetic models [18.9s] +✔ | 2 16 | Nonlinear mixed-effects models [148.4s] ──────────────────────────────────────────────────────────────────────────────── -Skip ('test_mixed.R:78'): saemix results are reproducible for biphasic fits +Skip ('test_mixed.R:80:3'): saemix results are reproducible for biphasic fits Reason: Fitting with saemix takes around 10 minutes when using deSolve -Skip ('test_mixed.R:131'): SFO-SFO saemix specific analytical solution work +Skip ('test_mixed.R:133:3'): SFO-SFO saemix specific analytical solution work Reason: This is seldom used, so save some time ──────────────────────────────────────────────────────────────────────────────── ✔ | 3 | Test dataset classes mkinds and mkindsg @@ -31,14 +31,14 @@ Reason: This is seldom used, so save some time ✔ | 3 | mkinfit features [0.5s] ✔ | 8 | mkinmod model generation and printing ✔ | 3 | Model predictions with mkinpredict [0.1s] -✔ | 12 | Multistart method for saem.mmkin models [23.1s] +✔ | 12 | Multistart method for saem.mmkin models [23.3s] ✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.5s] -✔ | 9 | Nonlinear mixed-effects models with nlme [3.9s] -✔ | 15 | Plotting [4.4s] +✔ | 9 | Nonlinear mixed-effects models with nlme [3.5s] +✔ | 15 | Plotting [4.5s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 1 36 | saemix parent models [31.1s] +✔ | 1 36 | saemix parent models [30.7s] ──────────────────────────────────────────────────────────────────────────────── -Skip ('test_saemix_parent.R:143'): We can also use mkin solution methods for saem +Skip ('test_saemix_parent.R:143:3'): We can also use mkin solution methods for saem Reason: This still takes almost 2.5 minutes although we do not solve ODEs ──────────────────────────────────────────────────────────────────────────────── ✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [0.5s] @@ -51,7 +51,7 @@ Reason: This still takes almost 2.5 minutes although we do not solve ODEs ✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [0.7s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 260.5 s +Duration: 259.6 s ── Skipped tests ────────────────────────────────────────────────────────────── • Fitting this ODE model with saemix takes about 15 minutes on my system (1) |