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Diffstat (limited to 'man/CAKE_export.Rd')
-rw-r--r-- | man/CAKE_export.Rd | 73 |
1 files changed, 73 insertions, 0 deletions
diff --git a/man/CAKE_export.Rd b/man/CAKE_export.Rd new file mode 100644 index 00000000..3a3da4d0 --- /dev/null +++ b/man/CAKE_export.Rd @@ -0,0 +1,73 @@ +\name{CAKE_export} +\alias{CAKE_export} +\title{ + Export a list of datasets in wide format to a CAKE study file +} +\description{ + In addition to the datasets, the pathways in the degradation + model can be specified as well. +} +\usage{ +CAKE_export(ds, map = c(parent = "Parent"), + links = NA, + filename = "CAKE_export.csf", path = ".", overwrite = FALSE, + study = "Codlemone aerobic soil degradation", + description = "", + time_unit = "days", + res_unit = "\% AR", + comment = "Created using mkin::CAKE_export", + date = Sys.Date(), + optimiser = "IRLS") +} +\arguments{ + \item{ds}{ + A named list of datasets in long format as compatible with + \code{\link{mkinfit}}. + } + \item{map}{ + A character vector with CAKE compartment names (Parent, A1, ...), + named with the names used in the list of datasets. + } + \item{links}{ + An optional character vector of target compartments, named with + the names of the source compartments. In order to make this + easier, the names are used as in the datasets supplied. + } + \item{filename}{ + Where to write the result. Should end in .csf in order to be compatible + with CAKE. + } + \item{path}{ + An optional path to the output file. + } + \item{overwrite}{ + If TRUE, existing files are overwritten. + } + \item{study}{ + The name of the study. + } + \item{description}{ + An optional description. + } + \item{time_unit}{ + The time unit for the residue data. + } + \item{res_unit}{ + The unit used for the residues. + } + \item{comment}{ + An optional comment. + } + \item{date}{ + The date of file creation. + } + \item{optimiser}{ + Can be OLS or IRLS. + } +} +\value{ + The function is called for its side effect. +} +\author{ + Johannes Ranke +} |