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diff --git a/man/mhmkin.Rd b/man/mhmkin.Rd new file mode 100644 index 00000000..0ef1599e --- /dev/null +++ b/man/mhmkin.Rd @@ -0,0 +1,75 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/mhmkin.R +\name{mhmkin} +\alias{mhmkin} +\alias{mhmkin.list} +\alias{[.mhmkin} +\alias{print.mhmkin} +\title{Fit nonlinear mixed-effects models built from one or more kinetic +degradation models and one or more error models} +\usage{ +mhmkin(objects, backend = "saemix", algorithm = "saem", ...) + +\method{mhmkin}{list}( + objects, + backend = "saemix", + ..., + cores = if (Sys.info()["sysname"] == "Windows") 1 else parallel::detectCores(), + cluster = NULL +) + +\method{[}{mhmkin}(x, i, j, ..., drop = FALSE) + +\method{print}{mhmkin}(x, ...) +} +\arguments{ +\item{objects}{A list of \link{mmkin} objects containing fits of the same +degradation models to the same data, but using different error models.} + +\item{backend}{The backend to be used for fitting. Currently, only saemix is +supported} + +\item{algorithm}{The algorithm to be used for fitting (currently not used)} + +\item{\dots}{Further arguments that will be passed to the nonlinear mixed-effects +model fitting function.} + +\item{cores}{The number of cores to be used for multicore processing. This +is only used when the \code{cluster} argument is \code{NULL}. On Windows +machines, cores > 1 is not supported, you need to use the \code{cluster} +argument to use multiple logical processors. Per default, all cores detected +by \code{\link[parallel:detectCores]{parallel::detectCores()}} are used, except on Windows where the default +is 1.} + +\item{cluster}{A cluster as returned by \link{makeCluster} to be used for +parallel execution.} + +\item{x}{An \link{mhmkin} object.} + +\item{i}{Row index selecting the fits for specific models} + +\item{j}{Column index selecting the fits to specific datasets} + +\item{drop}{If FALSE, the method always returns an mhmkin object, otherwise +either a list of fit objects or a single fit object.} +} +\value{ +A two-dimensional \link{array} of fit objects and/or try-errors that can +be indexed using the degradation model names for the first index (row index) +and the error model names for the second index (column index), with class +attribute 'mhmkin'. + +An object of class \code{\link{mhmkin}}. +} +\description{ +The name of the methods expresses that (\strong{m}ultiple) \strong{h}ierarchichal +(also known as multilevel) \strong{m}ulticompartment \strong{kin}etic models are +fitted. Our kinetic models are nonlinear, so we can use various nonlinear +mixed-effects model fitting functions. +} +\seealso{ +\code{\link{[.mhmkin}} for subsetting \link{mhmkin} objects +} +\author{ +Johannes Ranke +} |